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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05286 and MPMX19_05287 are separated by 25 nucleotides
MPMX19_05287 and MPMX19_05288 are separated by 2 nucleotides
MPMX19_05288 and MPMX19_05289 are separated by 193 nucleotides
MPMX19_05289 and MPMX19_05290 are separated by 85 nucleotides
MPMX19_05286: MPMX19_05286 - putative Ni/Fe-hydrogenase B-type cytochrome subunit, at 821,000 to 821,794
_05286
MPMX19_05287: MPMX19_05287 - Uptake hydrogenase large subunit, at 821,820 to 823,634
_05287
MPMX19_05288: MPMX19_05288 - Uptake hydrogenase small subunit, at 823,637 to 824,710
_05288
MPMX19_05289: MPMX19_05289 - hypothetical protein, at 824,904 to 825,452
_05289
MPMX19_05290: MPMX19_05290 - Hydrogenase transcriptional regulatory protein hupR1, at 825,538 to 827,025
_05290
Group
Condition
MPMX19
_05286
MPMX19
_05287
MPMX19
_05288
MPMX19
_05289
MPMX19
_05290
mgl
MGL
-0.1
+0.2
+0.1
-0.4
-0.8
nf_with_fulln
NF_with_fullN
+0.1
-0.2
-0.2
-0.1
-0.4
mgl
MGL
-0.1
-0.0
-0.2
-0.1
-0.3
nf_with_fulln
NF_with_fullN
+0.3
-0.4
-0.1
-0.0
-0.3
nln
NLN
+0.1
-0.1
-0.1
-0.1
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.1
-0.0
-0.0
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.1
-0.0
-0.2
-0.4
nln
NLN
+0.1
-0.2
-0.1
-0.1
+0.0
mgl
MGL
-0.1
+0.2
-0.1
+0.0
-0.3
nf_with_fulln
NF_with_fullN
+0.1
-0.3
-0.1
-0.0
+0.0
nf
NF
+0.1
-0.2
-0.2
+0.0
+0.1
nf_with_fulln
NF_with_fullN
+0.3
-0.2
-0.0
-0.2
-0.1
nln
NLN
+0.1
-0.2
+0.0
-0.2
+0.2
nln
NLN
+0.2
-0.1
+0.1
-0.2
-0.0
nf_with_fulln
NF_with_fullN
+0.2
-0.1
+0.1
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.1
+0.0
-0.2
+0.2
mgl
MGL
+0.1
-0.4
+0.3
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.1
-0.0
+0.3
-0.1
nf
NF
-0.0
-0.1
-0.0
-0.2
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.1
+0.2
-0.0
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.0
+0.0
-0.1
-0.2
nl-ccm_agar
NL-CCM_agar
-0.0
+0.2
+0.1
+0.0
-0.2
mgl
MGL
+0.0
+0.2
-0.2
+0.0
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.1
+0.1
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.1
+0.1
-0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.0
+0.3
-0.2
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.0
-0.1
+0.2
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.1
-0.0
+0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.1
+0.3
-0.2
-0.3
mgl
MGL
+0.0
-0.0
+0.1
+0.3
+0.3
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