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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05259 and MPMX19_05260 are separated by 170 nucleotides
MPMX19_05260 and MPMX19_05261 overlap by 4 nucleotides
MPMX19_05261 and MPMX19_05262 are separated by 90 nucleotides
MPMX19_05262 and MPMX19_05263 are separated by 6 nucleotides
MPMX19_05259: MPMX19_05259 - hypothetical protein, at 791,595 to 792,749
_05259
MPMX19_05260: MPMX19_05260 - Cobalt-zinc-cadmium resistance protein CzcA, at 792,920 to 796,042
_05260
MPMX19_05261: MPMX19_05261 - Multidrug resistance protein MdtE, at 796,039 to 797,157
_05261
MPMX19_05262: MPMX19_05262 - hypothetical protein, at 797,248 to 797,880
_05262
MPMX19_05263: MPMX19_05263 - hypothetical protein, at 797,887 to 799,308
_05263
Group
Condition
MPMX19
_05259
MPMX19
_05260
MPMX19
_05261
MPMX19
_05262
MPMX19
_05263
mgl
MGL
-0.4
+0.0
-1.1
-0.9
+0.3
mgl
MGL
+0.1
-0.0
-0.4
-0.8
+0.0
nf_with_fulln
NF_with_fullN
-0.2
+0.0
-0.3
-0.4
-0.2
mgl
MGL
-0.2
-0.2
-0.4
-0.2
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.0
-0.8
-0.2
+0.2
nf_with_fulln
NF_with_fullN
-0.1
+0.1
-0.0
-0.5
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.2
-0.4
-0.3
-0.0
nf_with_fulln
NF_with_fullN
-0.2
-0.0
-0.0
-0.1
-0.4
nln
NLN
-0.2
+0.0
-0.3
-0.1
-0.1
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.0
-0.3
-0.4
+0.2
nln
NLN
-0.1
-0.1
-0.2
-0.3
+0.0
nf_with_fulln
NF_with_fullN
-0.2
+0.1
+0.1
-0.5
-0.0
mgl
MGL
+0.3
+0.0
-0.6
-0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.1
-0.4
-0.3
+0.2
nf_with_fulln
NF_with_fullN
+0.0
+0.1
+0.1
-0.4
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.1
-0.3
-0.2
+0.3
nl-ccm_agar
NL-CCM_agar
-0.1
+0.1
-0.4
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.0
-0.5
+0.2
-0.1
nl-ccm_agar
NL-CCM_agar
-0.1
+0.0
-0.2
-0.2
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.0
+0.3
-0.2
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.1
-0.1
-0.2
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.1
-0.0
-0.2
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.1
+0.4
-0.2
+0.1
mgl
MGL
-0.1
+0.0
-0.7
+0.2
+0.8
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
+0.0
+0.4
-0.3
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.1
-0.1
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.2
+0.1
-0.4
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
+0.2
+0.2
-0.3
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.0
+0.4
+0.2
+0.1
mgl
MGL
+0.3
+0.2
-0.0
+0.0
+0.3
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