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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05203 and MPMX19_05204 overlap by 4 nucleotides
MPMX19_05204 and MPMX19_05205 are separated by 4 nucleotides
MPMX19_05205 and MPMX19_05206 are separated by 482 nucleotides
MPMX19_05206 and MPMX19_05207 are separated by 142 nucleotides
MPMX19_05203: MPMX19_05203 - hypothetical protein, at 707,604 to 708,515
_05203
MPMX19_05204: MPMX19_05204 - Vitamin B12 import ATP-binding protein BtuD, at 708,512 to 709,348
_05204
MPMX19_05205: MPMX19_05205 - hypothetical protein, at 709,353 to 710,384
_05205
MPMX19_05206: MPMX19_05206 - Toxin RTX-I translocation ATP-binding protein, at 710,867 to 713,029
_05206
MPMX19_05207: MPMX19_05207 - Hemolysin secretion protein D, plasmid, at 713,172 to 714,488
_05207
Group
Condition
MPMX19
_05203
MPMX19
_05204
MPMX19
_05205
MPMX19
_05206
MPMX19
_05207
mgl
MGL
-0.3
-0.1
-0.5
+0.1
-1.3
mgl
MGL
-0.7
+0.2
+0.3
-0.0
-1.2
nf_with10percent_fulln
NF_with10percent_fullN
+1.3
+0.1
+0.4
+0.1
-3.1
nln
NLN
-0.1
+0.1
+0.2
+0.1
-1.3
nl-ccm
NL-CCM, start OD=0.3
-1.5
-0.4
+0.4
+0.1
+0.4
mgl
MGL
-0.1
+0.4
-1.0
+0.3
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.8
+0.4
-0.2
+0.1
-0.3
nln
NLN
-0.4
+0.0
+0.3
+0.1
-0.6
nf_with_fulln
NF_with_fullN
+0.3
+0.2
+0.3
+0.1
-1.0
mgl
MGL
+0.2
-0.2
+0.5
-0.2
-0.4
nl-ccm_agar
NL-CCM_agar
+0.0
+0.3
+0.5
+0.0
-0.8
nf_with10percent_fulln
NF_with10percent_fullN
+1.2
-0.2
-0.6
+0.3
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.6
-0.1
+0.5
-0.1
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.5
-0.1
+0.3
+0.1
+0.8
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.7
+0.2
+0.4
-0.0
-0.3
nf_with_fulln
NF_with_fullN
+0.6
+0.2
+0.3
+0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.0
+0.2
-0.1
+1.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.3
+0.2
-0.2
+0.1
+0.9
nf_with10percent_fulln
NF_with10percent_fullN
+0.9
+0.2
+0.8
-0.0
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.4
-0.0
+0.5
+0.1
+0.5
mgl
MGL
-0.1
-0.0
+0.6
+0.3
+0.9
nl-ccm
NL-CCM, start OD=0.1
+0.6
+0.2
+0.5
+0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+1.0
+0.2
+0.4
+0.2
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
+0.0
+0.5
+0.0
+1.0
nf_with_fulln
NF_with_fullN
+0.5
+0.3
+0.5
+0.2
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.3
+0.4
+0.1
+0.7
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.6
+0.1
+0.1
+0.1
+1.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.8
+0.1
+0.2
+0.1
+0.8
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.4
+0.3
+0.5
-0.0
+0.8
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.8
+0.3
+0.9
+0.2
+0.5
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