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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05087 and MPMX19_05088 are separated by 454 nucleotides
MPMX19_05088 and MPMX19_05089 are separated by 0 nucleotides
MPMX19_05089 and MPMX19_05090 overlap by 4 nucleotides
MPMX19_05090 and MPMX19_05091 are separated by 4 nucleotides
MPMX19_05087: MPMX19_05087 - hypothetical protein, at 575,783 to 576,679
_05087
MPMX19_05088: MPMX19_05088 - Enterobactin exporter EntS, at 577,134 to 578,369
_05088
MPMX19_05089: MPMX19_05089 - Acetyl-CoA acetyltransferase, at 578,370 to 579,539
_05089
MPMX19_05090: MPMX19_05090 - putative acyl--CoA ligase YhfT, at 579,536 to 581,035
_05090
MPMX19_05091: MPMX19_05091 - Biotin transporter BioY, at 581,040 to 581,588
_05091
Group
Condition
MPMX19
_05087
MPMX19
_05088
MPMX19
_05089
MPMX19
_05090
MPMX19
_05091
nf_with_fulln
NF_with_fullN
-0.2
-0.0
-0.7
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
+0.0
-1.0
+0.1
N.D.
mgl
MGL
-0.3
+0.1
-0.3
-0.6
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
-0.1
-0.9
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.0
-0.4
-0.4
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
-0.1
-0.6
-0.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.0
-0.3
-0.3
N.D.
nln
NLN
-0.2
+0.0
-0.4
-0.1
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
+0.0
-0.3
-0.4
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
-0.1
-0.0
-0.3
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.1
+0.0
-0.5
-0.1
N.D.
mgl
MGL
-0.4
+0.0
+0.5
-0.7
N.D.
nf_with_fulln
NF_with_fullN
-0.2
+0.1
-0.3
-0.0
N.D.
mgl
MGL
-0.0
-0.1
-0.4
+0.1
N.D.
nln
NLN
-0.2
+0.1
-0.2
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.1
+0.0
-0.4
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.1
-0.3
-0.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.1
+0.4
-0.5
N.D.
nln
NLN
-0.1
-0.1
+0.3
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.0
-0.4
-0.0
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.1
+0.3
-0.2
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.0
+0.4
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.0
+0.5
-0.1
N.D.
nf
NF
-0.2
+0.2
+0.4
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.2
-0.1
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.2
+0.4
-0.3
N.D.
nf_with_fulln
NF_with_fullN
-0.2
+0.0
+0.1
+0.4
N.D.
nln
NLN
-0.0
+0.0
+0.7
+0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.1
+0.5
-0.2
N.D.
mgl
MGL
+0.0
+0.0
+0.8
+0.3
N.D.
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