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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05084 and MPMX19_05085 are separated by 22 nucleotides
MPMX19_05085 and MPMX19_05086 are separated by 225 nucleotides
MPMX19_05086 and MPMX19_05087 are separated by 54 nucleotides
MPMX19_05087 and MPMX19_05088 are separated by 454 nucleotides
MPMX19_05084: MPMX19_05084 - hypothetical protein, at 573,610 to 573,885
_05084
MPMX19_05085: MPMX19_05085 - hypothetical protein, at 573,908 to 574,333
_05085
MPMX19_05086: MPMX19_05086 - Formate-dependent phosphoribosylglycinamide formyltransferase, at 574,559 to 575,728
_05086
MPMX19_05087: MPMX19_05087 - hypothetical protein, at 575,783 to 576,679
_05087
MPMX19_05088: MPMX19_05088 - Enterobactin exporter EntS, at 577,134 to 578,369
_05088
Group
Condition
MPMX19
_05084
MPMX19
_05085
MPMX19
_05086
MPMX19
_05087
MPMX19
_05088
nl-ccm_agar
NL-CCM_agar
-0.4
-0.5
-0.1
-0.0
-0.0
nf
NF
-0.5
-0.4
-0.2
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
-0.5
-0.2
-0.0
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.4
-0.1
-0.2
-0.1
mgl
MGL
+0.3
-0.5
-0.4
-0.4
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.4
-0.2
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.5
-0.1
-0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
-0.2
-0.0
-0.2
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.5
-0.0
-0.0
-0.1
mgl
MGL
-0.3
-0.5
-0.1
+0.0
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.1
-0.4
-0.1
-0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.4
-0.0
-0.1
-0.1
mgl
MGL
-0.3
-0.2
-0.1
-0.3
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.4
+0.1
-0.1
+0.1
mgl
MGL
+0.2
-1.0
+0.1
+0.1
-0.0
mgl
MGL
-0.2
-0.6
+0.3
+0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.4
+0.1
-0.0
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.4
+0.2
-0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.4
-0.3
-0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.4
-0.4
-0.2
-0.0
-0.1
nln
NLN
+0.2
-0.4
+0.1
-0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.0
+0.6
-0.2
-0.2
+0.0
nf_with_fulln
NF_with_fullN
+0.1
+0.2
+0.3
-0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.0
-0.0
+0.5
-0.2
nln
NLN
+0.1
+0.3
+0.2
-0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.3
-0.0
+0.4
-0.2
nln
NLN
+0.2
+0.2
+0.2
-0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.5
+0.4
+0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.6
-0.0
+0.5
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.7
-0.0
+0.5
+0.1
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