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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05077 and MPMX19_05078 are separated by 2 nucleotides
MPMX19_05078 and MPMX19_05079 are separated by 141 nucleotides
MPMX19_05079 and MPMX19_05080 are separated by 429 nucleotides
MPMX19_05080 and MPMX19_05081 overlap by 4 nucleotides
MPMX19_05077: MPMX19_05077 - Magnetosome protein MamZ, at 561,987 to 562,745
_05077
MPMX19_05078: MPMX19_05078 - Protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 562,748 to 563,695
_05078
MPMX19_05079: MPMX19_05079 - hypothetical protein, at 563,837 to 564,058
_05079
MPMX19_05080: MPMX19_05080 - Sensor histidine kinase RcsC, at 564,488 to 570,412
_05080
MPMX19_05081: MPMX19_05081 - Sensor histidine kinase RcsC, at 570,409 to 572,814
_05081
Group
Condition
MPMX19
_05077
MPMX19
_05078
MPMX19
_05079
MPMX19
_05080
MPMX19
_05081
nf_with_fulln
NF_with_fullN
+0.0
-0.2
N.D.
-0.2
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.1
-0.1
N.D.
-0.0
-0.3
nf_with_fulln
NF_with_fullN
-0.0
-0.4
N.D.
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.2
N.D.
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.0
N.D.
+0.0
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.0
N.D.
-0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.2
-0.2
N.D.
-0.2
-0.1
nl-ccm_agar
NL-CCM_agar
-0.1
-0.2
N.D.
+0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.2
-0.0
N.D.
-0.2
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.0
N.D.
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.1
N.D.
+0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.1
N.D.
-0.1
-0.2
nf_with_fulln
NF_with_fullN
+0.2
-0.1
N.D.
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.2
N.D.
-0.2
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.1
N.D.
+0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.1
N.D.
-0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-0.1
N.D.
+0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.0
N.D.
+0.2
-0.1
nf_with_fulln
NF_with_fullN
+0.2
-0.2
N.D.
-0.0
+0.0
mgl
MGL
-0.1
-0.2
N.D.
+0.0
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.1
N.D.
+0.1
-0.1
nl-ccm_agar
NL-CCM_agar
-0.1
+0.1
N.D.
+0.0
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.2
N.D.
-0.1
-0.1
mgl
MGL
-0.2
+0.2
N.D.
+0.0
-0.1
mgl
MGL
+0.3
+0.1
N.D.
+0.0
-0.2
nl-ccm
NL-CCM, start OD=0.3
+0.1
+0.2
N.D.
+0.1
-0.2
mgl
MGL
+0.1
-0.1
N.D.
+0.1
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.2
N.D.
+0.1
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.0
N.D.
+0.1
+0.2
nl-ccm_agar
NL-CCM_agar
-0.0
+0.2
N.D.
+0.2
+0.0
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