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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05023 and MPMX19_05024 are separated by 211 nucleotides
MPMX19_05024 and MPMX19_05025 are separated by 5 nucleotides
MPMX19_05025 and MPMX19_05026 are separated by 56 nucleotides
MPMX19_05026 and MPMX19_05027 are separated by 105 nucleotides
MPMX19_05023: MPMX19_05023 - hypothetical protein, at 508,498 to 509,124
_05023
MPMX19_05024: MPMX19_05024 - Cytochrome bd-II ubiquinol oxidase subunit 1, at 509,336 to 510,733
_05024
MPMX19_05025: MPMX19_05025 - Cytochrome bd-I ubiquinol oxidase subunit 2, at 510,739 to 511,758
_05025
MPMX19_05026: MPMX19_05026 - hypothetical protein, at 511,815 to 512,516
_05026
MPMX19_05027: MPMX19_05027 - hypothetical protein, at 512,622 to 513,341
_05027
Group
Condition
MPMX19
_05023
MPMX19
_05024
MPMX19
_05025
MPMX19
_05026
MPMX19
_05027
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-2.9
+0.1
+0.2
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.8
-0.0
+0.1
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.9
+0.1
+0.1
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-2.0
+0.1
-0.0
+0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.1
-0.4
-0.2
-0.4
mgl
MGL
-1.3
-0.0
+0.0
-0.2
-0.0
mgl
MGL
-1.4
+0.1
-0.1
-0.1
+0.0
nln
NLN
-1.5
-0.1
-0.0
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.6
-0.0
+0.0
+0.1
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.3
+0.1
-0.0
+0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.5
+0.1
-0.0
+0.1
+0.0
nf
NF
-2.0
+0.3
+0.2
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.4
-0.0
-0.0
+0.2
+0.1
nln
NLN
-1.1
+0.1
-0.2
+0.3
-0.1
nln
NLN
-0.9
+0.2
-0.1
+0.0
-0.1
nf_with_fulln
NF_with_fullN
-1.6
+0.2
-0.0
+0.3
+0.1
nl-ccm
NL-CCM, start OD=0.1
-1.2
+0.1
+0.1
+0.0
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-1.2
-0.1
+0.2
+0.2
+0.0
nln
NLN
-1.2
+0.1
+0.2
+0.1
+0.0
nl-ccm_agar
NL-CCM_agar
-1.1
+0.1
-0.1
+0.1
+0.1
nf_with_fulln
NF_with_fullN
-0.8
-0.2
-0.3
+0.2
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.0
+0.0
+0.1
+0.2
-0.0
nf
NF
-1.0
+0.0
-0.0
+0.3
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.1
+0.2
-0.0
+0.3
+0.2
nln
NLN
-0.9
+0.2
+0.2
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.8
+0.0
+0.1
+0.3
+0.2
mgl
MGL
-0.9
+0.3
+0.5
+0.3
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.9
+0.2
+0.1
+0.1
+0.4
mgl
MGL
+0.5
-0.1
-0.2
+0.2
-0.3
mgl
MGL
+0.9
+0.0
+0.1
+0.4
-0.1
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