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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05016 and MPMX19_05017 are separated by 216 nucleotides
MPMX19_05017 and MPMX19_05018 overlap by 29 nucleotides
MPMX19_05018 and MPMX19_05019 are separated by 230 nucleotides
MPMX19_05019 and MPMX19_05020 are separated by 11 nucleotides
MPMX19_05016: MPMX19_05016 - Sensor histidine kinase RcsC, at 497,255 to 498,133
_05016
MPMX19_05017: MPMX19_05017 - hypothetical protein, at 498,350 to 499,816
_05017
MPMX19_05018: MPMX19_05018 - HTH-type transcriptional regulator RamB, at 499,788 to 501,236
_05018
MPMX19_05019: MPMX19_05019 - Propionyl-CoA carboxylase beta chain, at 501,467 to 502,999
_05019
MPMX19_05020: MPMX19_05020 - Acetyl-/propionyl-coenzyme A carboxylase alpha chain, at 503,011 to 505,011
_05020
Group
Condition
MPMX19
_05016
MPMX19
_05017
MPMX19
_05018
MPMX19
_05019
MPMX19
_05020
nf_with10percent_fulln
NF_with10percent_fullN
-2.8
-0.8
-0.1
-0.0
-0.5
mgl
MGL
-3.1
-0.2
+0.1
+0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-3.0
-0.6
-0.0
+0.3
-0.0
mgl
MGL
-1.9
+0.2
+0.2
-0.7
-0.5
mgl
MGL
-1.9
-0.2
+0.5
-0.2
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.0
+0.2
+0.0
-0.7
-0.1
nl-ccm_agar
NL-CCM_agar
-1.6
+0.1
+0.1
-0.2
-0.0
nf_with_fulln
NF_with_fullN
-1.5
-0.3
-0.1
+0.1
+0.2
mgl
MGL
-0.8
-0.1
-0.1
-0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.9
-0.3
+0.1
-0.3
+0.1
nln
NLN
-1.0
-0.3
-0.0
-0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.9
-0.1
-0.1
+0.0
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-1.2
+0.1
+0.0
-0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.9
-0.5
-0.1
+0.2
+0.3
nl-ccm
NL-CCM, start OD=0.3
-0.9
-0.3
+0.2
-0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.4
-0.1
+0.1
-0.2
nf
NF
-0.7
-0.1
-0.1
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.8
-0.0
+0.0
-0.2
+0.2
nl-ccm_agar
NL-CCM_agar
-0.9
+0.1
+0.1
-0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.6
-0.3
-0.1
+0.2
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.0
+0.1
+0.2
+0.2
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.8
+0.1
+0.3
-0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.6
+0.4
-0.0
-0.2
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.8
+0.2
+0.2
-0.1
+0.3
nl-ccm_agar
NL-CCM_agar
+0.7
-0.1
+0.3
-0.4
-0.1
nl-ccm_agar
NL-CCM_agar
+0.9
+0.1
+0.1
-0.2
-0.2
nln
NLN
+0.6
-0.2
+0.3
+0.1
+0.2
nln
NLN
+0.4
+0.1
+0.2
+0.0
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.6
+0.2
+0.1
+0.3
+0.0
nln
NLN
+0.4
-0.1
+0.2
+0.4
+0.4
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