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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04965 and MPMX19_04966 are separated by 183 nucleotides
MPMX19_04966 and MPMX19_04967 overlap by 4 nucleotides
MPMX19_04967 and MPMX19_04968 are separated by 88 nucleotides
MPMX19_04968 and MPMX19_04969 are separated by 64 nucleotides
MPMX19_04965: MPMX19_04965 - Lipopolysaccharide assembly protein B, at 429,004 to 431,145
_04965
MPMX19_04966: MPMX19_04966 - hypothetical protein, at 431,329 to 432,492
_04966
MPMX19_04967: MPMX19_04967 - ADP-heptose--LPS heptosyltransferase 2, at 432,489 to 433,499
_04967
MPMX19_04968: MPMX19_04968 - hypothetical protein, at 433,588 to 434,139
_04968
MPMX19_04969: MPMX19_04969 - Glutamine-dependent NAD(+) synthetase, at 434,204 to 436,249
_04969
Group
Condition
MPMX19
_04965
MPMX19
_04966
MPMX19
_04967
MPMX19
_04968
MPMX19
_04969
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
N.D.
N.D.
-2.0
-0.1
mgl
MGL
-0.2
N.D.
N.D.
-1.2
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
N.D.
N.D.
-1.6
-0.2
nl-ccm_agar
NL-CCM_agar
+0.2
N.D.
N.D.
-2.0
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
N.D.
N.D.
-1.4
+0.0
nl-ccm
NL-CCM, start OD=0.3
-0.1
N.D.
N.D.
-1.3
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
N.D.
N.D.
-1.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
N.D.
N.D.
-1.0
-0.2
mgl
MGL
-0.4
N.D.
N.D.
-1.1
+0.0
nln
NLN
-0.1
N.D.
N.D.
-1.2
-0.1
nln
NLN
-0.2
N.D.
N.D.
-1.0
-0.2
nln
NLN
-0.1
N.D.
N.D.
-1.0
-0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
N.D.
N.D.
-1.0
-0.2
nf
NF
-0.1
N.D.
N.D.
-1.1
-0.1
nln
NLN
+0.0
N.D.
N.D.
-1.2
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-0.8
-0.4
nln
NLN
-0.0
N.D.
N.D.
-0.9
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
N.D.
N.D.
-0.9
-0.1
nln
NLN
+0.0
N.D.
N.D.
-0.8
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-0.6
-0.3
nln
NLN
-0.1
N.D.
N.D.
-0.9
+0.0
nl-ccm_agar
NL-CCM_agar
+0.0
N.D.
N.D.
-0.8
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
N.D.
N.D.
-0.7
-0.2
nl-ccm_agar
NL-CCM_agar
+0.2
N.D.
N.D.
-0.9
-0.1
mgl
MGL
-0.1
N.D.
N.D.
+0.7
-0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
N.D.
N.D.
+0.5
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
N.D.
N.D.
+0.5
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
N.D.
N.D.
+0.8
-0.3
nl-ccm
NL-CCM, start OD=0.1
-0.1
N.D.
N.D.
+0.7
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
N.D.
N.D.
+0.7
-0.2
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