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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04880 and MPMX19_04881 overlap by 4 nucleotides
MPMX19_04881 and MPMX19_04882 overlap by 4 nucleotides
MPMX19_04882 and MPMX19_04883 are separated by 100 nucleotides
MPMX19_04883 and MPMX19_04884 are separated by 678 nucleotides
MPMX19_04880: MPMX19_04880 - Inner membrane ABC transporter permease protein YdcV, at 323,798 to 324,631
_04880
MPMX19_04881: MPMX19_04881 - Putrescine transport system permease protein PotH, at 324,628 to 325,572
_04881
MPMX19_04882: MPMX19_04882 - Spermidine/putrescine import ATP-binding protein PotA, at 325,569 to 326,732
_04882
MPMX19_04883: MPMX19_04883 - Spermidine-binding periplasmic protein SpuE, at 326,833 to 327,930
_04883
MPMX19_04884: MPMX19_04884 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 328,609 to 328,983
_04884
Group
Condition
MPMX19
_04880
MPMX19
_04881
MPMX19
_04882
MPMX19
_04883
MPMX19
_04884
nf_with_fulln
NF_with_fullN
-0.5
-1.1
-1.0
-0.8
-0.0
nf_with_fulln
NF_with_fullN
-0.6
-1.0
-0.6
-0.9
+0.1
nf_with_fulln
NF_with_fullN
-0.5
-1.2
-0.6
-0.8
+0.2
mgl
MGL
-1.0
-1.0
-0.6
-0.6
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-1.0
-1.0
-0.4
+0.0
mgl
MGL
-0.2
-0.8
-1.0
-0.9
+0.1
mgl
MGL
-0.9
-0.8
-0.3
-0.5
-0.0
mgl
MGL
-0.0
-0.6
-0.9
-1.1
+0.1
nf_with_fulln
NF_with_fullN
-0.3
-0.7
-0.8
-0.7
+0.2
nf_with_fulln
NF_with_fullN
-0.5
-0.9
-0.4
-0.6
+0.3
nf_with_fulln
NF_with_fullN
-0.4
-0.7
-0.3
-0.7
+0.2
mgl
MGL
+0.1
-1.1
-0.5
-0.5
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.7
-0.6
-0.5
+0.5
mgl
MGL
+0.2
-0.5
-0.8
-0.8
+0.3
nl-ccm
NL-CCM, start OD=0.3
-0.1
-0.5
-0.3
-0.7
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
-0.2
-0.3
-0.4
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.8
-0.8
-0.2
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.7
-0.8
-0.1
+0.8
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.3
-0.3
-0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-0.6
-0.6
-0.0
+0.6
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.2
-0.3
-0.3
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
-0.3
-0.3
-0.2
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
-0.2
+0.1
-0.5
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.0
-0.4
+0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.4
-0.1
-0.3
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
-0.4
-0.1
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.4
+0.1
-0.3
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.3
-0.4
-0.1
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.3
-0.3
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
-0.3
+0.3
+0.1
-0.3
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