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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04859 and MPMX19_04860 are separated by 51 nucleotides
MPMX19_04860 and MPMX19_04861 are separated by 130 nucleotides
MPMX19_04861 and MPMX19_04862 are separated by 272 nucleotides
MPMX19_04862 and MPMX19_04863 are separated by 18 nucleotides
MPMX19_04859: MPMX19_04859 - Vitamin B12 import ATP-binding protein BtuD, at 294,079 to 298,164
_04859
MPMX19_04860: MPMX19_04860 - Type I secretion system membrane fusion protein PrsE, at 298,216 to 299,538
_04860
MPMX19_04861: MPMX19_04861 - hypothetical protein, at 299,669 to 299,932
_04861
MPMX19_04862: MPMX19_04862 - hypothetical protein, at 300,205 to 301,752
_04862
MPMX19_04863: MPMX19_04863 - Transcriptional regulatory protein LnrK, at 301,771 to 302,505
_04863
Group
Condition
MPMX19
_04859
MPMX19
_04860
MPMX19
_04861
MPMX19
_04862
MPMX19
_04863
mgl
MGL
-0.3
-0.4
-2.4
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
+0.1
-0.2
-0.1
-1.8
mgl
MGL
+0.1
-0.2
-0.5
+0.2
-1.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.1
+0.1
-0.2
-1.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.2
-1.0
-0.4
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.0
+0.0
+0.2
-1.5
mgl
MGL
-0.0
-0.0
+0.2
-0.4
-0.8
mgl
MGL
-0.2
+0.1
+0.6
-0.4
-1.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
+0.0
+0.2
-1.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.0
-1.3
+0.2
+0.6
nl-ccm_agar
NL-CCM_agar
+0.1
-0.0
-0.8
-0.1
+0.4
nln
NLN
-0.0
+0.0
-0.5
-0.2
+0.5
nl-ccm_agar
NL-CCM_agar
+0.1
+0.2
-0.3
-0.4
+0.4
nf_with_fulln
NF_with_fullN
+0.1
+0.0
+0.5
+0.2
-0.7
nln
NLN
+0.1
+0.3
-0.8
+0.1
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.1
-0.5
-0.2
+0.7
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.1
-0.4
-0.2
+0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.0
-0.3
-0.4
+0.8
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.1
-0.3
+0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.1
+0.3
-0.2
+0.6
nln
NLN
+0.0
+0.1
-0.4
+0.1
+0.8
nln
NLN
+0.1
+0.2
-0.6
+0.3
+0.8
nf_with_fulln
NF_with_fullN
+0.1
+0.1
-0.3
+0.5
+0.4
nf_with_fulln
NF_with_fullN
+0.2
+0.3
+0.6
+0.4
-0.4
nl-ccm_agar
NL-CCM_agar
+0.1
-0.0
+0.8
+0.4
-0.2
nln
NLN
+0.1
+0.0
+0.4
+0.2
+0.6
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
+0.0
+0.0
-0.1
+1.2
mgl
MGL
-0.1
+0.0
+0.4
+0.2
+0.8
nf_with_fulln
NF_with_fullN
+0.2
+0.2
+0.5
+0.3
+0.3
nf_with_fulln
NF_with_fullN
-0.1
+0.1
+0.5
+0.6
+0.5
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