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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04832 and MPMX19_04833 are separated by 2 nucleotides
MPMX19_04833 and MPMX19_04834 overlap by 4 nucleotides
MPMX19_04834 and MPMX19_04835 are separated by 15 nucleotides
MPMX19_04835 and MPMX19_04836 are separated by 22 nucleotides
MPMX19_04832: MPMX19_04832 - FeS cluster assembly protein SufD, at 239,288 to 240,655
_04832
MPMX19_04833: MPMX19_04833 - Cysteine desulfurase, at 240,658 to 241,920
_04833
MPMX19_04834: MPMX19_04834 - Zinc-dependent sulfurtransferase SufU, at 241,917 to 242,384
_04834
MPMX19_04835: MPMX19_04835 - hypothetical protein, at 242,400 to 242,861
_04835
MPMX19_04836: MPMX19_04836 - Iron-binding protein IscA, at 242,884 to 243,228
_04836
Group
Condition
MPMX19
_04832
MPMX19
_04833
MPMX19
_04834
MPMX19
_04835
MPMX19
_04836
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-1.8
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.6
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-1.6
N.D.
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
N.D.
-1.6
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-1.5
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.5
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.5
N.D.
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
N.D.
-1.4
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.4
N.D.
mgl
MGL
N.D.
N.D.
N.D.
-1.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.3
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-1.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.2
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
-1.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
-1.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
N.D.
-1.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-1.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
-1.1
N.D.
mgl
MGL
N.D.
N.D.
N.D.
-1.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-1.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
-1.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-1.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-0.9
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-0.9
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
-0.8
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-0.8
N.D.
nln
NLN
N.D.
N.D.
N.D.
-0.7
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+1.0
N.D.
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