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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04786 and MPMX19_04787 overlap by 4 nucleotides
MPMX19_04787 and MPMX19_04788 overlap by 4 nucleotides
MPMX19_04788 and MPMX19_04789 are separated by 5 nucleotides
MPMX19_04789 and MPMX19_04790 overlap by 4 nucleotides
MPMX19_04786: MPMX19_04786 - Thymidylate kinase, at 183,922 to 185,208
_04786
MPMX19_04787: MPMX19_04787 - hypothetical protein, at 185,205 to 185,969
_04787
MPMX19_04788: MPMX19_04788 - D-inositol-3-phosphate glycosyltransferase, at 185,966 to 187,231
_04788
MPMX19_04789: MPMX19_04789 - hypothetical protein, at 187,237 to 188,124
_04789
MPMX19_04790: MPMX19_04790 - hypothetical protein, at 188,121 to 188,927
_04790
Group
Condition
MPMX19
_04786
MPMX19
_04787
MPMX19
_04788
MPMX19
_04789
MPMX19
_04790
mgl
MGL
-0.5
N.D.
-0.4
+0.3
+0.0
mgl
MGL
+0.3
N.D.
-0.1
+0.2
-0.6
mgl
MGL
+0.1
N.D.
+0.3
-0.1
-0.4
nl-ccm_agar
NL-CCM_agar
+0.3
N.D.
-0.2
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
N.D.
+0.4
-0.4
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
N.D.
-0.2
+0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
N.D.
+0.0
-0.2
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
N.D.
+0.3
-0.2
-0.2
nf
NF
+0.2
N.D.
+0.5
-0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.5
N.D.
-0.1
-0.0
+0.0
nf_with_fulln
NF_with_fullN
+0.2
N.D.
+0.3
+0.2
-0.3
nl-ccm
NL-CCM, start OD=0.3
+0.3
N.D.
+0.3
-0.4
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
N.D.
+0.2
-0.2
+0.2
nf_with_fulln
NF_with_fullN
-0.1
N.D.
+0.4
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.4
N.D.
+0.2
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
N.D.
+0.4
-0.1
+0.0
nln
NLN
+0.2
N.D.
+0.3
+0.3
-0.1
nln
NLN
+0.3
N.D.
+0.5
+0.0
-0.2
nf
NF
+0.2
N.D.
+0.3
-0.1
+0.3
nl-ccm
NL-CCM, start OD=0.1
+0.3
N.D.
+0.0
+0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
N.D.
+0.3
-0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.5
N.D.
+0.3
+0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
N.D.
+0.2
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
N.D.
+0.3
+0.2
+0.2
nln
NLN
+0.4
N.D.
+0.2
+0.2
+0.1
nln
NLN
+0.4
N.D.
+0.3
-0.0
+0.1
nf_with_fulln
NF_with_fullN
+0.3
N.D.
+0.4
+0.1
-0.0
mgl
MGL
+0.6
N.D.
-0.2
+0.2
+0.4
nf_with_fulln
NF_with_fullN
+0.5
N.D.
+0.6
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
N.D.
+0.8
+0.1
+0.4
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