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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04765 and MPMX19_04766 overlap by 4 nucleotides
MPMX19_04766 and MPMX19_04767 are separated by 221 nucleotides
MPMX19_04767 and MPMX19_04768 are separated by 25 nucleotides
MPMX19_04768 and MPMX19_04769 overlap by 4 nucleotides
MPMX19_04765: MPMX19_04765 - HTH-type transcriptional repressor CytR, at 155,929 to 156,990
_04765
MPMX19_04766: MPMX19_04766 - Glycine cleavage system transcriptional activator, at 156,987 to 157,934
_04766
MPMX19_04767: MPMX19_04767 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 158,156 to 158,905
_04767
MPMX19_04768: MPMX19_04768 - Apulose-4-phosphate transketolase subunit A, at 158,931 to 159,788
_04768
MPMX19_04769: MPMX19_04769 - Apulose-4-phosphate transketolase subunit B, at 159,785 to 160,801
_04769
Group
Condition
MPMX19
_04765
MPMX19
_04766
MPMX19
_04767
MPMX19
_04768
MPMX19
_04769
nf_with_fulln
NF_with_fullN
-0.5
-1.1
-0.0
-0.0
+0.2
mgl
MGL
-0.4
+0.0
-0.3
-0.7
-0.1
nf_with_fulln
NF_with_fullN
-0.1
-0.4
-0.2
-0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.6
-0.2
-0.0
-0.2
-0.0
nf_with_fulln
NF_with_fullN
-0.3
-0.5
-0.2
-0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.3
-0.2
-0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.5
+0.0
-0.2
-0.1
-0.2
nl-ccm
NL-CCM, start OD=0.3
-0.4
-0.2
+0.0
-0.2
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.5
-0.1
+0.1
-0.2
nf_with_fulln
NF_with_fullN
+0.2
-0.3
-0.1
-0.3
-0.1
mgl
MGL
-0.8
+0.5
+0.0
-0.5
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.6
-0.2
-0.5
+0.1
mgl
MGL
-0.1
-0.3
+0.2
-0.2
-0.2
mgl
MGL
-0.5
-0.1
+0.0
-0.2
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.4
+0.1
+0.2
-0.1
mgl
MGL
+0.6
-0.1
-0.3
-0.2
-0.2
mgl
MGL
+0.3
-0.3
+0.4
-0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.1
+0.4
-0.1
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.4
-0.1
+0.2
-0.1
nl-ccm_agar
NL-CCM_agar
+0.3
-0.4
+0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
+0.2
+0.4
-0.0
+0.0
nl-ccm
NL-CCM, start OD=0.1
+0.2
-0.0
+0.1
+0.2
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.3
+0.1
-0.3
+0.1
nf
NF
-0.2
+0.2
+0.3
+0.3
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.3
+0.2
-0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.5
+0.3
-0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
-0.1
+0.1
+0.4
+0.3
nl-ccm
NL-CCM, start OD=0.3
+0.4
-0.3
+0.3
+0.5
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.3
+0.3
+0.2
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.4
+0.2
+0.0
+0.1
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