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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04717 and MPMX19_04718 are separated by 752 nucleotides
MPMX19_04718 and MPMX19_04719 are separated by 82 nucleotides
MPMX19_04719 and MPMX19_04720 are separated by 65 nucleotides
MPMX19_04720 and MPMX19_04721 are separated by 167 nucleotides
MPMX19_04717: MPMX19_04717 - hypothetical protein, at 104,669 to 105,559
_04717
MPMX19_04718: MPMX19_04718 - Carnitine monooxygenase oxygenase subunit, at 106,312 to 107,592
_04718
MPMX19_04719: MPMX19_04719 - 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component, at 107,675 to 108,796
_04719
MPMX19_04720: MPMX19_04720 - HTH-type transcriptional activator RhaS, at 108,862 to 110,058
_04720
MPMX19_04721: MPMX19_04721 - putative N-methylproline demethylase, at 110,226 to 112,271
_04721
Group
Condition
MPMX19
_04717
MPMX19
_04718
MPMX19
_04719
MPMX19
_04720
MPMX19
_04721
nf_with_fulln
NF_with_fullN
-0.6
-0.2
+0.1
-0.3
+0.0
nf_with_fulln
NF_with_fullN
-0.2
-0.4
+0.1
-0.2
-0.2
nf
NF
-0.2
-0.3
-0.1
-0.1
-0.2
nln
NLN
-0.4
-0.1
-0.1
-0.2
-0.1
nln
NLN
+0.1
-0.3
-0.3
-0.1
-0.2
nl-ccm
NL-CCM, start OD=0.1
+0.0
-0.3
-0.3
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.1
-0.1
-0.2
-0.2
nl-ccm_agar
NL-CCM_agar
+0.0
-0.2
-0.2
-0.2
-0.1
nf_with_fulln
NF_with_fullN
-0.0
-0.3
-0.1
-0.3
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.3
+0.0
+0.0
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.2
-0.3
+0.1
-0.0
mgl
MGL
-0.0
+0.0
-0.4
+0.1
-0.3
nf_with_fulln
NF_with_fullN
+0.1
-0.2
-0.3
-0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.4
+0.0
-0.2
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.4
+0.0
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
-0.1
+0.2
-0.1
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.3
-0.3
+0.2
-0.0
nl-ccm
NL-CCM, start OD=0.1
+0.2
-0.0
-0.3
+0.0
-0.2
nf
NF
-0.2
-0.1
+0.2
-0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.3
+0.0
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
+0.1
-0.2
+0.1
-0.2
nf_with_fulln
NF_with_fullN
-0.1
-0.1
+0.2
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.9
-0.4
+0.3
-0.5
mgl
MGL
-0.0
+0.4
+0.2
+0.2
-0.2
mgl
MGL
+0.5
+0.2
-0.2
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.8
-0.2
+0.0
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.1
+0.3
+0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.6
+0.3
+0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.7
+0.1
+0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.9
+0.1
+0.2
-0.1
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