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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04673 and MPMX19_04674 are separated by 22 nucleotides
MPMX19_04674 and MPMX19_04675 are separated by 262 nucleotides
MPMX19_04675 and MPMX19_04676 are separated by 36 nucleotides
MPMX19_04676 and MPMX19_04677 are separated by 204 nucleotides
MPMX19_04673: MPMX19_04673 - Purine ribonucleoside efflux pump NepI, at 58,661 to 59,878
_04673
MPMX19_04674: MPMX19_04674 - hypothetical protein, at 59,901 to 60,251
_04674
MPMX19_04675: MPMX19_04675 - HTH-type transcriptional regulator PgrR, at 60,514 to 61,407
_04675
MPMX19_04676: MPMX19_04676 - Acylamidase, at 61,444 to 62,850
_04676
MPMX19_04677: MPMX19_04677 - Sulfate/thiosulfate import ATP-binding protein CysA, at 63,055 to 64,173
_04677
Group
Condition
MPMX19
_04673
MPMX19
_04674
MPMX19
_04675
MPMX19
_04676
MPMX19
_04677
mgl
MGL
-1.6
+0.3
-0.7
-0.3
-0.0
mgl
MGL
-1.5
+0.1
-0.0
-0.1
-0.5
mgl
MGL
-1.1
-0.1
-0.1
-0.3
-0.1
nf_with_fulln
NF_with_fullN
-0.7
+0.2
-0.4
-0.2
-0.2
nln
NLN
-0.6
-0.1
-0.3
+0.1
-0.2
nf_with_fulln
NF_with_fullN
-0.7
-0.1
-0.4
-0.3
+0.4
nf
NF
-0.4
+0.1
-0.0
-0.4
-0.3
nf_with_fulln
NF_with_fullN
-0.7
+0.0
-0.1
+0.1
-0.2
mgl
MGL
-1.5
+0.2
+0.0
-0.2
+0.5
mgl
MGL
-0.5
+0.2
-0.1
-0.3
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.8
+0.0
-0.1
+0.1
+0.0
nf
NF
-0.7
+0.0
-0.1
-0.2
+0.2
nl-ccm
NL-CCM, start OD=0.3
-0.7
+0.1
-0.2
-0.0
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.2
-0.0
-0.2
-0.2
-0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
-0.1
-0.2
-0.1
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.3
-0.1
-0.3
-0.2
nf_with_fulln
NF_with_fullN
-0.3
-0.1
+0.2
-0.4
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.1
-0.7
+0.0
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.2
-0.3
-0.2
+0.3
nl-ccm
NL-CCM, start OD=0.3
-0.7
+0.5
+0.1
-0.2
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.3
+0.4
+0.2
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.3
+0.1
-0.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
+0.1
-0.1
+0.0
-0.4
nf
NF
-0.4
+0.0
-0.1
+0.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
+0.2
+0.2
+0.1
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.1
-0.3
+0.1
+0.5
nl-ccm_agar
NL-CCM_agar
-0.2
+0.2
+0.2
+0.2
+0.3
mgl
MGL
+1.0
-0.0
+0.2
-0.3
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.2
+0.3
+0.2
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.7
+0.3
+0.4
+0.0
+0.1
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