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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04605 and MPMX19_04606 are separated by 257 nucleotides
MPMX19_04606 and MPMX19_04607 are separated by 24 nucleotides
MPMX19_04607 and MPMX19_04608 are separated by 37 nucleotides
MPMX19_04608 and MPMX19_04609 are separated by 17 nucleotides
MPMX19_04605: MPMX19_04605 - IS6 family transposase ISBj7, at 991,011 to 991,724
_04605
MPMX19_04606: MPMX19_04606 - Long-chain-alcohol dehydrogenase 1, at 991,982 to 993,136
_04606
MPMX19_04607: MPMX19_04607 - hypothetical protein, at 993,161 to 993,607
_04607
MPMX19_04608: MPMX19_04608 - 3-ketoacyl-CoA thiolase, at 993,645 to 994,847
_04608
MPMX19_04609: MPMX19_04609 - Putative short-chain type dehydrogenase/reductase, at 994,865 to 995,800
_04609
Group
Condition
MPMX19
_04605
MPMX19
_04606
MPMX19
_04607
MPMX19
_04608
MPMX19
_04609
mgl
MGL
N.D.
+0.0
-0.1
-0.4
-0.3
mgl
MGL
N.D.
-0.4
+0.3
-0.3
-0.2
mgl
MGL
N.D.
-0.6
+0.2
-0.1
-0.2
nl-ccm
NL-CCM, start OD=0.1
N.D.
-0.3
+0.1
-0.4
+0.2
mgl
MGL
N.D.
-0.0
+0.2
+0.1
-0.5
nf
NF
N.D.
+0.2
+0.1
-0.2
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.0
+0.1
-0.4
+0.2
mgl
MGL
N.D.
-0.3
+0.2
-0.3
+0.5
nl-ccm_agar
NL-CCM_agar
N.D.
-0.1
+0.2
-0.2
+0.2
nln
NLN
N.D.
+0.2
-0.2
-0.1
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.3
+0.1
+0.0
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.0
+0.2
-0.2
+0.2
nf_with_fulln
NF_with_fullN
N.D.
-0.1
-0.1
-0.1
+0.7
nl-ccm
NL-CCM, start OD=0.1
N.D.
+0.0
+0.0
-0.2
+0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.2
+0.2
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.1
+0.2
-0.1
+0.2
nln
NLN
N.D.
+0.2
+0.2
-0.1
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.2
+0.2
-0.1
+0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.2
-0.2
+0.1
+0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.2
+0.1
+0.0
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.3
+0.1
-0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.3
-0.2
+0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.4
-0.1
+0.1
+0.4
nf_with_fulln
NF_with_fullN
N.D.
+0.0
+0.0
+0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.5
-0.1
-0.0
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.1
+0.2
+0.1
+0.5
nf_with_fulln
NF_with_fullN
N.D.
+0.4
+0.2
-0.0
+0.4
nln
NLN
N.D.
+0.4
+0.3
+0.0
+0.2
nf_with_fulln
NF_with_fullN
N.D.
+0.3
+0.1
+0.3
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.3
+0.0
-0.2
+0.8
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