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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04570 and MPMX19_04571 are separated by 323 nucleotides
MPMX19_04571 and MPMX19_04572 are separated by 118 nucleotides
MPMX19_04572 and MPMX19_04573 are separated by 12 nucleotides
MPMX19_04573 and MPMX19_04574 are separated by 23 nucleotides
MPMX19_04570: MPMX19_04570 - ECF RNA polymerase sigma factor SigF, at 948,872 to 949,429
_04570
MPMX19_04571: MPMX19_04571 - hypothetical protein, at 949,753 to 950,238
_04571
MPMX19_04572: MPMX19_04572 - Putative protein-methionine-sulfoxide reductase subunit YedZ1, at 950,357 to 951,010
_04572
MPMX19_04573: MPMX19_04573 - Putative protein-methionine-sulfoxide reductase subunit YedZ1, at 951,023 to 951,814
_04573
MPMX19_04574: MPMX19_04574 - hypothetical protein, at 951,838 to 953,844
_04574
Group
Condition
MPMX19
_04570
MPMX19
_04571
MPMX19
_04572
MPMX19
_04573
MPMX19
_04574
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
-0.6
+0.1
+0.2
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.6
-0.1
+0.3
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.4
+0.0
+0.2
+0.0
nf
NF
+0.0
-0.6
-0.1
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.7
+0.0
+0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.5
-0.1
+0.4
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.5
-0.6
-0.0
+0.0
-0.1
nln
NLN
+0.3
-0.6
+0.0
+0.1
+0.2
mgl
MGL
+0.0
-0.4
+0.2
+0.1
+0.1
mgl
MGL
-0.2
-0.7
+0.3
+0.5
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.4
+0.1
+0.1
+0.2
mgl
MGL
-0.6
-0.2
+0.5
+0.4
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.4
+0.0
+0.4
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
-0.5
-0.2
+0.3
+0.2
nl-ccm
NL-CCM, start OD=0.3
-0.2
-0.1
+0.0
+0.4
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.3
+0.7
-0.2
-0.3
nln
NLN
+0.2
-0.3
+0.3
+0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.1
+0.3
-0.2
-0.1
+0.3
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.1
+0.3
+0.3
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.4
+0.4
+0.3
+0.1
mgl
MGL
+0.3
-0.6
+0.5
+0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.3
+0.2
+0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.4
-0.0
-0.3
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.2
+0.2
+0.4
+0.1
nl-ccm_agar
NL-CCM_agar
-0.1
+0.3
+0.2
+0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.1
+0.8
+0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
+0.5
+0.2
+0.1
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.3
+0.4
+0.3
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.3
+0.7
+0.2
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.3
+0.8
+0.4
-0.2
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