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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04567 and MPMX19_04568 are separated by 6 nucleotides
MPMX19_04568 and MPMX19_04569 are separated by 175 nucleotides
MPMX19_04569 and MPMX19_04570 overlap by 4 nucleotides
MPMX19_04570 and MPMX19_04571 are separated by 323 nucleotides
MPMX19_04567: MPMX19_04567 - hypothetical protein, at 947,276 to 947,656
_04567
MPMX19_04568: MPMX19_04568 - hypothetical protein, at 947,663 to 948,064
_04568
MPMX19_04569: MPMX19_04569 - Anti-sigma-F factor NrsF, at 948,240 to 948,875
_04569
MPMX19_04570: MPMX19_04570 - ECF RNA polymerase sigma factor SigF, at 948,872 to 949,429
_04570
MPMX19_04571: MPMX19_04571 - hypothetical protein, at 949,753 to 950,238
_04571
Group
Condition
MPMX19
_04567
MPMX19
_04568
MPMX19
_04569
MPMX19
_04570
MPMX19
_04571
mgl
MGL
N.D.
-1.0
-0.8
+0.0
-0.4
mgl
MGL
N.D.
-0.7
-0.2
-0.6
-0.2
mgl
MGL
N.D.
-0.7
-0.0
-0.2
-0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.5
-0.1
-0.5
-0.6
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.3
+0.0
-0.3
-0.6
mgl
MGL
N.D.
-0.8
+0.0
+0.3
-0.6
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.1
-0.3
-0.2
-0.5
nf
NF
N.D.
-0.1
-0.3
+0.0
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.5
-0.5
-0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.6
-0.2
+0.2
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.1
-0.5
+0.2
-0.4
nl-ccm_agar
NL-CCM_agar
N.D.
+0.2
-0.6
-0.2
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.2
-0.2
-0.2
-0.4
nln
NLN
N.D.
-0.5
-0.0
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.2
-0.3
+0.2
-0.7
nln
NLN
N.D.
+0.1
-0.7
-0.2
+0.2
nl-ccm
NL-CCM, start OD=0.1
N.D.
-0.5
+0.1
+0.2
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.3
-0.4
+0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.2
-0.1
+0.4
-0.5
nln
NLN
N.D.
-0.1
+0.1
+0.3
-0.6
nl-ccm_agar
NL-CCM_agar
N.D.
+0.6
-0.4
+0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.0
-0.5
+0.4
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.3
-0.7
+0.3
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.3
-0.5
+0.3
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.4
+0.2
+0.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.2
+0.5
+0.5
-0.6
nl-ccm
NL-CCM, start OD=0.3
N.D.
+0.5
+0.4
-0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.5
-0.3
+0.4
+0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.5
+0.1
+0.2
+0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.1
+0.6
+0.1
+0.3
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