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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04562 and MPMX19_04563 are separated by 4 nucleotides
MPMX19_04563 and MPMX19_04564 are separated by 53 nucleotides
MPMX19_04564 and MPMX19_04565 are separated by 134 nucleotides
MPMX19_04565 and MPMX19_04566 overlap by 112 nucleotides
MPMX19_04562: MPMX19_04562 - hypothetical protein, at 943,518 to 944,435
_04562
MPMX19_04563: MPMX19_04563 - hypothetical protein, at 944,440 to 944,754
_04563
MPMX19_04564: MPMX19_04564 - hypothetical protein, at 944,808 to 945,473
_04564
MPMX19_04565: MPMX19_04565 - HTH-type transcriptional regulator PgrR, at 945,608 to 946,528
_04565
MPMX19_04566: MPMX19_04566 - hypothetical protein, at 946,417 to 947,196
_04566
Group
Condition
MPMX19
_04562
MPMX19
_04563
MPMX19
_04564
MPMX19
_04565
MPMX19
_04566
mgl
MGL
+0.1
-1.7
-0.0
-0.5
+0.1
mgl
MGL
+0.3
-1.7
+0.1
-0.3
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-1.0
-0.2
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.6
-0.1
+0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.8
+0.1
-0.3
+0.1
mgl
MGL
+0.1
+0.1
-0.1
-0.3
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.6
-0.2
+0.1
-0.1
nf
NF
+0.3
-0.7
-0.3
+0.3
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.6
-0.1
+0.3
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.7
+0.0
+0.1
-0.0
mgl
MGL
+0.2
-0.5
-0.3
+0.1
+0.3
nln
NLN
+0.2
-0.6
+0.1
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.4
-0.4
+0.3
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.6
+0.3
-0.0
+0.2
nl-ccm_agar
NL-CCM_agar
+0.2
-0.2
-0.4
+0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.3
+0.2
+0.2
-0.3
nl-ccm_agar
NL-CCM_agar
+0.1
-0.5
-0.1
+0.3
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.6
+0.2
+0.3
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.0
-0.3
+0.4
+0.2
nf_with_fulln
NF_with_fullN
-0.0
-0.3
+0.6
+0.2
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
+0.4
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.3
-0.0
-0.2
+0.4
nln
NLN
-0.2
+0.5
+0.3
-0.1
-0.1
nl-ccm
NL-CCM, start OD=0.3
-0.1
+0.7
+0.1
-0.3
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.8
-0.1
+0.1
+0.0
nln
NLN
-0.1
+0.6
+0.3
+0.0
-0.1
nf_with_fulln
NF_with_fullN
+0.0
+0.3
+0.3
+0.4
-0.1
nf_with_fulln
NF_with_fullN
+0.1
+0.4
+0.3
+0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.3
+0.7
+0.6
+0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.6
+0.5
+0.5
-0.2
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