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Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04548 and MPMX19_04549 are separated by 47 nucleotides
MPMX19_04549 and MPMX19_04550 are separated by 79 nucleotides
MPMX19_04550 and MPMX19_04551 are separated by 13 nucleotides
MPMX19_04551 and MPMX19_04552 are separated by 62 nucleotides
MPMX19_04548: MPMX19_04548 - 4-hydroxy-tetrahydrodipicolinate synthase, at 925,225 to 926,118
_04548
MPMX19_04549: MPMX19_04549 - L-cystine-binding protein FliY, at 926,166 to 926,996
_04549
MPMX19_04550: MPMX19_04550 - L-cystine transport system permease protein YecS, at 927,076 to 927,771
_04550
MPMX19_04551: MPMX19_04551 - HTH-type transcriptional repressor RspR, at 927,785 to 928,474
_04551
MPMX19_04552: MPMX19_04552 - D-hydantoinase, at 928,537 to 929,961
_04552
Group
Condition
MPMX19
_04548
MPMX19
_04549
MPMX19
_04550
MPMX19
_04551
MPMX19
_04552
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-0.0
+0.0
-1.5
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.6
+0.3
-1.1
-0.4
nf_with_fulln
NF_with_fullN
-0.1
-0.2
+0.1
-1.5
+0.0
mgl
MGL
-0.4
-0.4
-0.0
-0.7
-0.0
nf_with_fulln
NF_with_fullN
-0.1
+0.1
-0.1
-1.1
+0.0
nf_with_fulln
NF_with_fullN
-0.2
+0.3
+0.0
-1.3
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
+0.4
-0.1
-0.8
-0.1
nl-ccm_agar
NL-CCM_agar
-0.3
+0.4
+0.1
-0.5
-0.1
nln
NLN
-0.1
+0.4
+0.0
-0.7
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.0
-0.1
+0.8
-0.1
nl-ccm_agar
NL-CCM_agar
-0.2
+0.2
-0.2
+0.5
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
+0.3
-0.2
+0.4
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.1
-0.3
+0.8
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.8
-0.2
-0.1
-0.1
nln
NLN
-0.1
+0.4
-0.2
+0.6
-0.1
nf
NF
-0.3
+0.3
+0.0
+0.7
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.3
-0.2
+0.7
+0.1
nl-ccm_agar
NL-CCM_agar
-0.1
+0.2
+0.1
+0.7
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.5
+0.0
+0.7
-0.1
mgl
MGL
+0.2
+0.1
-0.3
+1.1
-0.1
nl-ccm_agar
NL-CCM_agar
-0.1
+0.3
-0.0
+0.9
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.0
-0.2
+1.4
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.3
-0.1
+0.9
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.4
+0.1
+0.7
-0.0
nl-ccm
NL-CCM, start OD=0.1
-0.0
+0.1
-0.1
+1.3
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.2
+0.1
+1.1
+0.0
mgl
MGL
+0.2
-0.0
-0.0
+0.8
+0.3
nln
NLN
-0.0
+0.3
-0.0
+1.1
+0.0
mgl
MGL
-0.1
+0.0
+0.2
+1.3
+0.1
nln
NLN
-0.0
+0.4
-0.1
+1.3
+0.0
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