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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04522 and MPMX19_04523 are separated by 60 nucleotides
MPMX19_04523 and MPMX19_04524 are separated by 117 nucleotides
MPMX19_04524 and MPMX19_04525 overlap by 4 nucleotides
MPMX19_04525 and MPMX19_04526 are separated by 25 nucleotides
MPMX19_04522: MPMX19_04522 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 894,639 to 895,397
_04522
MPMX19_04523: MPMX19_04523 - hypothetical protein, at 895,458 to 896,513
_04523
MPMX19_04524: MPMX19_04524 - hypothetical protein, at 896,631 to 898,397
_04524
MPMX19_04525: MPMX19_04525 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 898,394 to 899,461
_04525
MPMX19_04526: MPMX19_04526 - Short-chain-enoyl-CoA hydratase, at 899,487 to 900,320
_04526
Group
Condition
MPMX19
_04522
MPMX19
_04523
MPMX19
_04524
MPMX19
_04525
MPMX19
_04526
nf_with_fulln
NF_with_fullN
-0.6
-0.1
-0.0
-0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-1.1
+0.0
-0.0
+0.3
N.D.
mgl
MGL
-0.7
-0.0
+0.2
-0.3
N.D.
mgl
MGL
-0.1
-0.0
-0.1
-0.5
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.6
-0.1
+0.0
-0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.7
+0.1
-0.0
-0.0
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.6
+0.0
+0.1
-0.2
N.D.
nf
NF
-0.6
+0.2
+0.1
-0.3
N.D.
nf
NF
-0.9
+0.2
+0.1
+0.2
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.6
+0.2
+0.1
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.6
+0.1
+0.2
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.1
+0.2
-0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.8
+0.3
+0.2
+0.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
-0.1
+0.1
+0.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.4
+0.2
+0.2
-0.2
N.D.
nl-ccm_agar
NL-CCM_agar
-0.5
+0.3
+0.1
-0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.1
+0.2
+0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
+0.1
+0.0
+0.4
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
+0.2
+0.1
+0.1
N.D.
mgl
MGL
-0.6
+0.2
+0.4
+0.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
+0.1
+0.1
+0.2
N.D.
mgl
MGL
-0.4
-0.0
+0.1
+0.3
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
+0.1
+0.2
+0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.1
+0.1
+0.2
N.D.
mgl
MGL
-0.4
+0.3
+0.4
-0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
+0.2
+0.1
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.1
+0.2
+0.3
N.D.
nf_with_fulln
NF_with_fullN
+0.6
-0.1
-0.1
+0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.5
-0.1
-0.0
+0.3
N.D.
nf_with_fulln
NF_with_fullN
+0.4
+0.1
+0.1
+0.2
N.D.
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