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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04517 and MPMX19_04518 are separated by 2 nucleotides
MPMX19_04518 and MPMX19_04519 are separated by 431 nucleotides
MPMX19_04519 and MPMX19_04520 are separated by 10 nucleotides
MPMX19_04520 and MPMX19_04521 overlap by 4 nucleotides
MPMX19_04517: MPMX19_04517 - Glycine cleavage system transcriptional activator, at 889,890 to 890,936
_04517
MPMX19_04518: MPMX19_04518 - Acetyl-CoA:oxalate CoA-transferase, at 890,939 to 892,141
_04518
MPMX19_04519: MPMX19_04519 - hypothetical protein, at 892,573 to 893,742
_04519
MPMX19_04520: MPMX19_04520 - hypothetical protein, at 893,753 to 894,184
_04520
MPMX19_04521: MPMX19_04521 - Bifunctional protein PaaZ, at 894,181 to 894,642
_04521
Group
Condition
MPMX19
_04517
MPMX19
_04518
MPMX19
_04519
MPMX19
_04520
MPMX19
_04521
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.5
-0.0
+0.1
-1.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.1
-0.2
-0.8
-0.4
mgl
MGL
-0.0
-0.4
+0.0
-0.2
-0.5
mgl
MGL
+0.1
+0.0
+0.1
-0.6
-0.6
nf_with_fulln
NF_with_fullN
+0.0
-0.2
-0.2
-0.1
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.4
+0.1
-0.6
-0.0
nf_with_fulln
NF_with_fullN
+0.1
-0.2
+0.1
-0.5
-0.5
nf_with_fulln
NF_with_fullN
+0.1
-0.6
+0.1
-0.3
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-0.1
+0.1
-0.2
-0.4
nf
NF
+0.1
+0.0
-0.2
-0.4
-0.3
nln
NLN
+0.1
-0.4
-0.1
-0.3
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.1
-0.3
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.2
-0.5
-0.3
nf
NF
-0.0
+0.3
-0.0
-0.0
-0.6
mgl
MGL
+0.5
-0.2
+0.1
+0.3
-1.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.2
-0.3
+0.3
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.2
+0.1
-0.8
-0.0
mgl
MGL
+0.0
+0.0
-0.0
+0.6
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.4
-0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.4
+0.0
+0.1
-0.5
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.2
+0.1
-0.4
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.5
-0.1
+0.3
-0.0
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.5
+0.1
-0.4
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.1
+0.0
+0.4
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.1
+0.1
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.4
-0.0
+0.2
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.1
+0.1
+0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.3
+0.1
+0.4
+0.2
nl-ccm_agar
NL-CCM_agar
+0.2
+0.5
+0.0
+0.3
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.6
-0.0
+0.5
-0.1
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