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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04488 and MPMX19_04489 are separated by 20 nucleotides
MPMX19_04489 and MPMX19_04490 are separated by 187 nucleotides
MPMX19_04490 and MPMX19_04491 are separated by 16 nucleotides
MPMX19_04491 and MPMX19_04492 are separated by 233 nucleotides
MPMX19_04488: MPMX19_04488 - putative glutamine ABC transporter permease protein GlnM, at 854,582 to 855,250
_04488
MPMX19_04489: MPMX19_04489 - D-threonine aldolase, at 855,271 to 856,557
_04489
MPMX19_04490: MPMX19_04490 - 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, at 856,745 to 857,542
_04490
MPMX19_04491: MPMX19_04491 - Sensor histidine kinase RcsC, at 857,559 to 860,075
_04491
MPMX19_04492: MPMX19_04492 - hypothetical protein, at 860,309 to 860,551
_04492
Group
Condition
MPMX19
_04488
MPMX19
_04489
MPMX19
_04490
MPMX19
_04491
MPMX19
_04492
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.1
-0.9
-0.2
-1.4
mgl
MGL
+0.1
-0.2
+0.1
-0.1
-1.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.1
-0.4
-0.1
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.1
-0.4
-0.0
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.5
-0.3
-0.4
nf_with_fulln
NF_with_fullN
-0.1
-0.1
-0.1
+0.1
-0.7
nf_with_fulln
NF_with_fullN
-0.2
+0.0
-0.0
-0.0
-0.6
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
+0.0
+0.1
+0.1
-1.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.2
+0.0
+0.1
-0.9
nf
NF
+0.0
+0.2
-0.1
-0.3
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.2
-0.2
-0.8
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.2
-0.4
-0.2
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.0
-0.1
+0.1
-0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.2
-0.2
-0.2
-0.5
nf_with_fulln
NF_with_fullN
-0.0
+0.2
-0.1
+0.0
-0.6
mgl
MGL
+0.1
+0.0
-0.8
-0.3
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.0
+0.2
+0.1
-0.4
mgl
MGL
-0.0
+0.1
-0.3
-0.4
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.2
-0.5
+0.0
+0.2
nln
NLN
+0.1
+0.1
+0.2
-0.0
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.1
-0.1
+0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.1
+0.0
-0.3
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-0.1
-0.4
+0.1
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.1
+0.3
-0.2
+0.2
nl-ccm_agar
NL-CCM_agar
+0.0
+0.1
-0.3
+0.1
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
+0.4
-0.3
+0.0
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.2
-0.4
+0.1
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.1
-0.3
-0.1
+0.5
nl-ccm_agar
NL-CCM_agar
-0.0
+0.1
-0.2
+0.1
+0.6
mgl
MGL
-0.1
+0.1
-0.1
+0.1
+0.6
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