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Gene
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Cofit
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04465 and MPMX19_04466 are separated by 168 nucleotides
MPMX19_04466 and MPMX19_04467 are separated by 216 nucleotides
MPMX19_04467 and MPMX19_04468 are separated by 206 nucleotides
MPMX19_04468 and MPMX19_04469 overlap by 56 nucleotides
MPMX19_04465: MPMX19_04465 - Pantothenate synthetase, at 832,642 to 833,550
_04465
MPMX19_04466: MPMX19_04466 - hypothetical protein, at 833,719 to 833,883
_04466
MPMX19_04467: MPMX19_04467 - tRNA-Val, at 834,100 to 834,174
_04467
MPMX19_04468: MPMX19_04468 - hypothetical protein, at 834,381 to 835,286
_04468
MPMX19_04469: MPMX19_04469 - hypothetical protein, at 835,231 to 835,497
_04469
Group
Condition
MPMX19
_04465
MPMX19
_04466
MPMX19
_04467
MPMX19
_04468
MPMX19
_04469
mgl
MGL
-0.4
-0.7
N.D.
-0.1
-1.6
mgl
MGL
-0.1
-0.9
N.D.
+0.0
-1.6
nln
NLN
-0.3
-0.8
N.D.
+0.1
-0.9
nl-ccm_agar
NL-CCM_agar
-0.5
-0.7
N.D.
-0.2
-0.3
mgl
MGL
-0.3
+0.2
N.D.
-0.0
-1.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
-0.9
N.D.
+0.1
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.7
N.D.
-0.1
-0.6
nl-ccm
NL-CCM, start OD=0.3
-0.1
-0.7
N.D.
+0.0
-0.6
nln
NLN
-0.7
-0.6
N.D.
-0.2
+0.1
mgl
MGL
-0.3
+0.4
N.D.
-0.2
-1.1
mgl
MGL
-0.1
+0.0
N.D.
-0.2
-0.9
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.4
N.D.
-0.1
-0.5
nl-ccm_agar
NL-CCM_agar
-0.3
-0.5
N.D.
-0.1
-0.3
nl-ccm_agar
NL-CCM_agar
-0.0
-0.4
N.D.
-0.1
-0.6
nl-ccm
NL-CCM, start OD=0.1
-0.1
-0.5
N.D.
-0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.7
N.D.
-0.0
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
-0.5
N.D.
+0.0
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
-0.9
N.D.
+0.0
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
+0.3
N.D.
-0.2
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-1.1
N.D.
-0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.3
N.D.
+0.3
-0.7
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.7
N.D.
+0.0
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.7
N.D.
-0.1
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
+0.0
N.D.
+0.2
-0.7
nf_with_fulln
NF_with_fullN
+0.5
+0.1
N.D.
+0.2
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
+0.7
N.D.
-0.1
-0.6
nf_with_fulln
NF_with_fullN
+0.4
+0.4
N.D.
+0.2
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
+0.4
N.D.
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.5
N.D.
+0.2
-0.2
nf_with_fulln
NF_with_fullN
+0.3
+0.7
N.D.
+0.2
+0.6
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