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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04455 and MPMX19_04456 are separated by 99 nucleotides
MPMX19_04456 and MPMX19_04457 are separated by 61 nucleotides
MPMX19_04457 and MPMX19_04458 overlap by 4 nucleotides
MPMX19_04458 and MPMX19_04459 are separated by 154 nucleotides
MPMX19_04455: MPMX19_04455 - Arabinose 5-phosphate isomerase KdsD, at 822,271 to 822,726
_04455
MPMX19_04456: MPMX19_04456 - Histone deacetylase-like amidohydrolase, at 822,826 to 823,755
_04456
MPMX19_04457: MPMX19_04457 - Pyruvate, phosphate dikinase, at 823,817 to 825,532
_04457
MPMX19_04458: MPMX19_04458 - 2-hydroxy-3-oxopropionate reductase, at 825,529 to 826,107
_04458
MPMX19_04459: MPMX19_04459 - hypothetical protein, at 826,262 to 827,056
_04459
Group
Condition
MPMX19
_04455
MPMX19
_04456
MPMX19
_04457
MPMX19
_04458
MPMX19
_04459
mgl
MGL
N.D.
+0.1
-0.9
-1.6
-0.4
mgl
MGL
N.D.
-0.7
-0.7
-0.4
-0.5
mgl
MGL
N.D.
-0.1
-0.8
+0.1
-0.8
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.3
-0.6
+0.0
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.0
-0.4
-0.5
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.1
-0.6
-0.2
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.0
-0.1
-0.8
-0.2
nl-ccm_agar
NL-CCM_agar
N.D.
-0.1
-0.6
-0.1
-0.2
nln
NLN
N.D.
+0.0
-0.2
-0.5
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.1
-0.6
-0.2
-0.0
nl-ccm_agar
NL-CCM_agar
N.D.
-0.0
-0.3
-0.5
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.0
-0.5
-0.1
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.2
-0.3
-0.2
-0.6
nln
NLN
N.D.
+0.0
-0.7
+0.2
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.1
-0.5
-0.3
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.3
-0.3
+0.3
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.1
-0.3
-0.4
+0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
-0.4
-0.4
+0.3
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.0
-0.4
+0.2
-0.4
mgl
MGL
N.D.
-0.6
-0.5
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.2
-0.2
+0.1
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.1
-0.5
+0.2
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.1
-0.4
+0.5
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.1
-0.7
+0.3
+0.0
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.3
-0.3
+0.5
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.1
-0.4
+0.6
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.2
-0.2
+0.7
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.3
-0.3
+0.5
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.0
+0.3
+0.4
-0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.3
+0.3
-0.3
+0.3
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