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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04435 and MPMX19_04436 are separated by 260 nucleotides
MPMX19_04436 and MPMX19_04437 are separated by 63 nucleotides
MPMX19_04437 and MPMX19_04438 are separated by 43 nucleotides
MPMX19_04438 and MPMX19_04439 are separated by 293 nucleotides
MPMX19_04435: MPMX19_04435 - Succinate--CoA ligase [ADP-forming] subunit beta, at 799,815 to 801,014
_04435
MPMX19_04436: MPMX19_04436 - Formyl-CoA:oxalate CoA-transferase, at 801,275 to 802,549
_04436
MPMX19_04437: MPMX19_04437 - Oxalyl-CoA decarboxylase, at 802,613 to 804,376
_04437
MPMX19_04438: MPMX19_04438 - hypothetical protein, at 804,420 to 805,109
_04438
MPMX19_04439: MPMX19_04439 - Pca regulon regulatory protein, at 805,403 to 806,236
_04439
Group
Condition
MPMX19
_04435
MPMX19
_04436
MPMX19
_04437
MPMX19
_04438
MPMX19
_04439
mgl
MGL
+0.1
-0.3
+0.2
+0.1
-0.9
nf_with_fulln
NF_with_fullN
-0.3
+0.0
+0.0
-0.0
-0.6
mgl
MGL
+0.0
-0.1
-0.3
+0.1
-0.3
mgl
MGL
+0.1
-0.2
+0.0
-0.1
-0.4
nf
NF
+0.1
-0.2
-0.1
+0.1
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.2
-0.2
+0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.2
-0.1
+0.1
-0.4
nln
NLN
-0.1
-0.1
-0.1
+0.3
-0.3
nf_with_fulln
NF_with_fullN
-0.2
+0.1
+0.1
+0.1
-0.5
mgl
MGL
+0.3
-0.3
+0.0
-0.1
-0.2
nln
NLN
+0.2
+0.1
+0.1
-0.1
-0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.1
-0.1
+0.2
-0.3
nln
NLN
+0.3
+0.0
+0.0
-0.0
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.1
-0.1
+0.2
-0.2
nl-ccm_agar
NL-CCM_agar
+0.1
-0.2
+0.1
+0.2
-0.2
nl-ccm_agar
NL-CCM_agar
+0.1
+0.0
-0.1
+0.3
-0.3
nl-ccm_agar
NL-CCM_agar
+0.2
-0.2
-0.2
+0.2
-0.0
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.2
-0.1
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.0
+0.4
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.3
-0.1
+0.3
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
-0.2
-0.3
+0.1
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.1
-0.0
+0.3
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.4
-0.2
-0.1
+0.2
-0.1
nf
NF
+0.3
-0.1
+0.3
+0.2
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.3
-0.2
-0.0
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.2
+0.1
+0.4
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.1
+0.1
+0.2
+0.0
mgl
MGL
+0.1
-0.2
+0.1
+0.5
+0.0
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.1
+0.3
+0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.3
+0.1
+0.2
-0.4
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