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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04343 and MPMX19_04344 are separated by 4 nucleotides
MPMX19_04344 and MPMX19_04345 are separated by 154 nucleotides
MPMX19_04345 and MPMX19_04346 are separated by 96 nucleotides
MPMX19_04346 and MPMX19_04347 are separated by 398 nucleotides
MPMX19_04343: MPMX19_04343 - Efflux pump membrane transporter BepE, at 705,554 to 708,682
_04343
MPMX19_04344: MPMX19_04344 - Multidrug resistance protein MdtA, at 708,687 to 709,841
_04344
MPMX19_04345: MPMX19_04345 - hypothetical protein, at 709,996 to 710,298
_04345
MPMX19_04346: MPMX19_04346 - hypothetical protein, at 710,395 to 711,258
_04346
MPMX19_04347: MPMX19_04347 - ATP-dependent Clp protease proteolytic subunit, at 711,657 to 712,283
_04347
Group
Condition
MPMX19
_04343
MPMX19
_04344
MPMX19
_04345
MPMX19
_04346
MPMX19
_04347
mgl
MGL
+0.0
-0.0
-0.3
-0.1
-1.7
mgl
MGL
+0.2
+0.3
-0.6
-0.1
-1.1
nl-ccm_agar
NL-CCM_agar
-0.1
+0.0
-0.0
-0.0
-0.9
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.4
-0.5
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.1
-0.3
-0.0
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
-0.2
-0.1
-0.0
-0.5
nl-ccm
NL-CCM, start OD=0.1
+0.0
+0.1
-0.7
-0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.2
+0.0
+0.0
-0.7
mgl
MGL
+0.0
+0.3
+0.2
-0.0
-1.3
mgl
MGL
+0.2
+0.0
-0.8
-0.3
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.0
-0.3
-0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.3
+0.2
-0.1
-0.5
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.4
-0.1
+0.1
-0.4
nf
NF
-0.0
+0.3
-0.1
-0.1
-0.5
mgl
MGL
-0.1
+0.1
+0.5
-0.0
-0.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
+0.2
-0.1
+0.1
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.2
+0.2
+0.1
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.2
+0.4
+0.0
-0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.2
-0.4
-0.1
+0.2
nf
NF
+0.0
+0.3
+0.2
-0.0
-0.4
nln
NLN
-0.1
-0.1
-0.1
+0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.4
-0.2
+0.0
+1.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.4
+0.1
-0.0
+0.9
nf_with_fulln
NF_with_fullN
-0.1
-0.1
+0.3
+0.1
+0.6
nf_with_fulln
NF_with_fullN
-0.2
+0.1
+0.2
-0.1
+0.8
nf_with_fulln
NF_with_fullN
-0.1
-0.1
+0.3
+0.2
+0.7
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.0
+0.3
+0.0
+0.9
nf_with_fulln
NF_with_fullN
-0.1
+0.0
+0.2
+0.0
+1.0
nf_with_fulln
NF_with_fullN
-0.0
+0.1
+0.2
+0.1
+0.9
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.0
+0.2
+0.1
+1.2
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