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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04253 and MPMX19_04254 are separated by 238 nucleotides
MPMX19_04254 and MPMX19_04255 are separated by 100 nucleotides
MPMX19_04255 and MPMX19_04256 overlap by 4 nucleotides
MPMX19_04256 and MPMX19_04257 are separated by 172 nucleotides
MPMX19_04253: MPMX19_04253 - Aerobic C4-dicarboxylate transport protein, at 607,237 to 608,568
_04253
MPMX19_04254: MPMX19_04254 - NADP-dependent malic enzyme, at 608,807 to 611,119
_04254
MPMX19_04255: MPMX19_04255 - Lipopolysaccharide assembly protein B, at 611,220 to 613,253
_04255
MPMX19_04256: MPMX19_04256 - Photosystem I assembly protein Ycf3, at 613,250 to 617,269
_04256
MPMX19_04257: MPMX19_04257 - D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase, at 617,442 to 618,167
_04257
Group
Condition
MPMX19
_04253
MPMX19
_04254
MPMX19
_04255
MPMX19
_04256
MPMX19
_04257
mgl
MGL
-0.3
-1.2
-0.1
+0.1
-0.1
mgl
MGL
-0.3
-1.4
+0.3
+0.0
+0.0
mgl
MGL
-0.3
-0.8
-0.1
+0.1
-0.0
mgl
MGL
-0.1
-1.3
+0.1
+0.2
+0.1
nl-ccm_agar
NL-CCM_agar
-0.2
-0.4
-0.2
+0.1
-0.1
nln
NLN
-0.2
-0.7
-0.0
+0.1
+0.0
mgl
MGL
-0.2
-0.4
-0.2
-0.2
+0.3
mgl
MGL
+0.0
-0.8
+0.1
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.8
-0.3
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.6
-0.1
-0.0
+0.3
nf
NF
-0.4
-0.4
+0.0
+0.3
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.6
+0.0
+0.0
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-0.5
+0.0
-0.1
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.5
+0.2
+0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.4
+0.1
-0.0
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.4
-0.0
+0.1
+0.5
nf_with_fulln
NF_with_fullN
-0.2
-0.2
-0.4
-0.1
+1.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.4
+0.2
-0.0
+0.5
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.4
+0.3
+0.2
-0.0
nln
NLN
+0.1
-0.4
+0.2
+0.3
+0.1
nf_with_fulln
NF_with_fullN
-0.1
-0.4
-0.1
-0.0
+1.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.7
-0.2
-0.2
+1.4
nf_with_fulln
NF_with_fullN
-0.2
+0.2
-0.1
-0.1
+1.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.7
+0.1
-0.2
+1.5
nf_with_fulln
NF_with_fullN
-0.0
-0.1
-0.1
-0.1
+1.2
nf_with_fulln
NF_with_fullN
-0.0
-0.2
-0.1
+0.2
+1.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.3
+0.0
-0.4
+1.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.4
-0.2
-0.0
+1.8
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.9
+0.1
+0.1
+1.8
nf_with_fulln
NF_with_fullN
-0.1
+0.0
-0.0
+0.2
+1.2
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