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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04251 and MPMX19_04252 overlap by 4 nucleotides
MPMX19_04252 and MPMX19_04253 are separated by 274 nucleotides
MPMX19_04253 and MPMX19_04254 are separated by 238 nucleotides
MPMX19_04254 and MPMX19_04255 are separated by 100 nucleotides
MPMX19_04251: MPMX19_04251 - C4-dicarboxylate transport transcriptional regulatory protein DctD, at 603,745 to 605,115
_04251
MPMX19_04252: MPMX19_04252 - C4-dicarboxylate transport sensor protein DctB, at 605,112 to 606,962
_04252
MPMX19_04253: MPMX19_04253 - Aerobic C4-dicarboxylate transport protein, at 607,237 to 608,568
_04253
MPMX19_04254: MPMX19_04254 - NADP-dependent malic enzyme, at 608,807 to 611,119
_04254
MPMX19_04255: MPMX19_04255 - Lipopolysaccharide assembly protein B, at 611,220 to 613,253
_04255
Group
Condition
MPMX19
_04251
MPMX19
_04252
MPMX19
_04253
MPMX19
_04254
MPMX19
_04255
mgl
MGL
-0.2
-0.9
-0.1
-1.3
+0.1
mgl
MGL
-0.3
-0.1
-0.3
-1.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.6
+0.2
-0.9
+0.1
mgl
MGL
-0.4
+0.2
-0.3
-0.8
-0.1
mgl
MGL
+0.1
-0.1
-0.3
-1.4
+0.3
nln
NLN
-0.3
-0.1
-0.2
-0.7
-0.0
nf_with_fulln
NF_with_fullN
-0.2
-0.3
-0.2
-0.2
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.6
+0.1
-0.7
-0.2
nl-ccm
NL-CCM, start OD=0.1
-0.4
-0.1
-0.0
-0.5
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.0
-0.1
-0.6
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.0
+0.0
-0.8
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.6
-0.0
-0.2
-0.1
+0.0
nf_with_fulln
NF_with_fullN
-0.2
-0.1
-0.1
-0.4
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
-0.1
-0.1
-0.5
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.1
-0.1
-0.6
-0.1
mgl
MGL
-0.1
-0.0
+0.0
-0.8
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
-0.1
+0.0
-0.3
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
-0.1
-0.1
-0.4
+0.1
nl-ccm_agar
NL-CCM_agar
-0.1
+0.2
-0.2
-0.4
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.1
-0.0
-0.6
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.1
+0.2
-0.7
+0.1
nf
NF
-0.3
+0.3
-0.2
-0.2
-0.0
mgl
MGL
+0.2
+0.1
-0.2
-0.4
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.0
+0.2
-0.3
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.0
-0.2
-0.5
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.0
+0.1
-0.4
-0.2
nf_with_fulln
NF_with_fullN
+0.2
-0.3
-0.2
+0.2
-0.1
nln
NLN
-0.1
+0.1
+0.1
-0.4
+0.2
nl-ccm
NL-CCM, start OD=0.3
-0.1
+0.2
+0.1
-0.4
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
+0.1
+0.1
+0.2
+0.2
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