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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04167 and MPMX19_04168 overlap by 11 nucleotides
MPMX19_04168 and MPMX19_04169 are separated by 31 nucleotides
MPMX19_04169 and MPMX19_04170 are separated by 65 nucleotides
MPMX19_04170 and MPMX19_04171 are separated by 671 nucleotides
MPMX19_04167: MPMX19_04167 - Sulfate transport system permease protein CysT, at 487,042 to 487,944
_04167
MPMX19_04168: MPMX19_04168 - Sulfate transport system permease protein CysW, at 487,934 to 488,833
_04168
MPMX19_04169: MPMX19_04169 - Sulfate/thiosulfate import ATP-binding protein CysA, at 488,865 to 489,902
_04169
MPMX19_04170: MPMX19_04170 - Glutathione-regulated potassium-efflux system protein KefC, at 489,968 to 491,665
_04170
MPMX19_04171: MPMX19_04171 - 16S ribosomal RNA, at 492,337 to 493,818
_04171
Group
Condition
MPMX19
_04167
MPMX19
_04168
MPMX19
_04169
MPMX19
_04170
MPMX19
_04171
mgl
MGL
+0.2
-0.0
-0.2
+0.2
-2.7
nl-ccm_agar
NL-CCM_agar
+0.1
-0.4
+0.0
-0.1
-2.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.1
-0.2
-0.1
-1.9
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.4
-0.3
-0.3
-1.4
nln
NLN
+0.0
-0.1
-0.2
-0.2
-1.8
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.0
-0.2
-0.2
-2.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-0.0
-0.1
-0.1
-1.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.3
-0.3
-0.2
-1.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.2
-0.1
-0.1
-1.7
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.3
-0.2
-0.2
-1.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.3
-0.4
-0.1
-0.9
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.0
+0.0
-0.4
-1.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-0.0
-0.1
-0.1
-1.2
mgl
MGL
+0.4
-0.2
-0.0
+0.4
-2.0
nf_with_fulln
NF_with_fullN
+0.1
-0.3
-0.1
-0.4
-0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.3
-0.2
-0.2
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.2
-0.1
-0.2
-0.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.3
-0.1
-0.2
-0.9
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.2
+0.0
-0.2
-1.1
nln
NLN
+0.2
-0.0
-0.1
-0.3
-0.9
nl-ccm
NL-CCM, start OD=0.1
+0.2
-0.4
-0.1
-0.1
-0.9
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.0
+0.0
-1.3
nl-ccm_agar
NL-CCM_agar
+0.0
-0.1
+0.1
-0.1
-1.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.1
-0.2
+0.0
-1.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.3
+0.2
-0.2
-0.8
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.3
-0.0
-0.2
-0.6
nln
NLN
+0.2
+0.1
-0.1
-0.3
-0.7
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.1
-0.0
-0.2
-0.8
mgl
MGL
+0.1
-0.3
-0.4
+0.3
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.0
-0.1
-0.5
+1.0
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