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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04104 and MPMX19_04105 are separated by 137 nucleotides
MPMX19_04105 and MPMX19_04106 are separated by 27 nucleotides
MPMX19_04106 and MPMX19_04107 are separated by 152 nucleotides
MPMX19_04107 and MPMX19_04108 overlap by 4 nucleotides
MPMX19_04104: MPMX19_04104 - hypothetical protein, at 410,512 to 411,090
_04104
MPMX19_04105: MPMX19_04105 - hypothetical protein, at 411,228 to 411,701
_04105
MPMX19_04106: MPMX19_04106 - hypothetical protein, at 411,729 to 412,103
_04106
MPMX19_04107: MPMX19_04107 - Sensor histidine kinase RcsC, at 412,256 to 415,762
_04107
MPMX19_04108: MPMX19_04108 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 415,759 to 416,670
_04108
Group
Condition
MPMX19
_04104
MPMX19
_04105
MPMX19
_04106
MPMX19
_04107
MPMX19
_04108
mgl
MGL
-0.8
-0.2
-0.0
+0.1
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.6
-0.1
-0.1
-0.0
-0.0
mgl
MGL
-0.4
-0.6
+0.2
+0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
-0.3
+0.1
+0.0
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
-0.2
+0.1
-0.0
+0.0
nl-ccm_agar
NL-CCM_agar
-0.4
-0.1
+0.2
-0.0
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.2
-0.1
-0.1
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
+0.0
+0.3
+0.0
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.3
-0.3
+0.1
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
-0.0
+0.2
+0.0
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.0
+0.3
-0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.2
-0.2
-0.1
-0.2
mgl
MGL
-0.4
+0.2
+0.2
+0.1
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
-0.1
+0.2
+0.0
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.2
-0.3
-0.1
-0.4
nl-ccm_agar
NL-CCM_agar
-0.3
-0.1
+0.1
+0.0
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.3
-0.2
+0.1
+0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.2
+0.2
+0.0
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
-0.2
+0.3
+0.2
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.4
-0.0
+0.3
+0.2
-0.0
nl-ccm_agar
NL-CCM_agar
-0.5
-0.0
+0.1
+0.1
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
-0.0
+0.0
+0.1
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.2
+0.3
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
-0.1
+0.3
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
-0.1
+0.1
+0.2
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
+0.1
+0.4
+0.2
+0.1
nln
NLN
-0.3
+0.2
+0.2
+0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
+0.2
+0.3
+0.3
+0.0
nl-ccm_agar
NL-CCM_agar
-0.3
+0.0
+0.2
+0.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.0
+0.3
+0.2
+0.4
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