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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04087 and MPMX19_04088 overlap by 4 nucleotides
MPMX19_04088 and MPMX19_04089 are separated by 46 nucleotides
MPMX19_04089 and MPMX19_04090 are separated by 41 nucleotides
MPMX19_04090 and MPMX19_04091 are separated by 4 nucleotides
MPMX19_04087: MPMX19_04087 - Flagellum site-determining protein YlxH, at 390,483 to 391,280
_04087
MPMX19_04088: MPMX19_04088 - Signal recognition particle 54 kDa protein, at 391,277 to 392,557
_04088
MPMX19_04089: MPMX19_04089 - Flagellar biosynthesis protein FlhA, at 392,604 to 394,775
_04089
MPMX19_04090: MPMX19_04090 - Anaerobic nitric oxide reductase transcription regulator NorR, at 394,817 to 396,373
_04090
MPMX19_04091: MPMX19_04091 - Chemotaxis protein PomA, at 396,378 to 397,316
_04091
Group
Condition
MPMX19
_04087
MPMX19
_04088
MPMX19
_04089
MPMX19
_04090
MPMX19
_04091
nl-ccm_agar
NL-CCM_agar
-1.6
-0.3
-1.2
-1.4
-0.8
nl-ccm_agar
NL-CCM_agar
-1.7
-0.4
-1.0
-0.8
-0.7
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-2.6
+0.6
-1.4
-0.5
-0.5
nl-ccm_agar
NL-CCM_agar
-0.9
-0.7
-0.9
-1.0
-0.8
nl-ccm_agar
NL-CCM_agar
-1.5
-0.4
-0.9
-0.8
-0.6
nl-ccm_agar
NL-CCM_agar
-1.0
-0.7
-0.9
-0.9
-0.6
nl-ccm_agar
NL-CCM_agar
-1.1
-0.9
-0.7
-0.9
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-2.1
+0.2
-1.2
-0.2
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-2.2
+0.2
-1.2
-0.4
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-2.1
+0.2
-1.2
-0.4
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.9
+0.2
-1.2
-0.4
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.7
+0.3
-1.3
-0.6
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.0
-0.3
-0.8
-0.9
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-2.0
+0.4
-1.1
-0.4
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.7
+0.2
-1.1
-0.4
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-2.0
+0.5
-1.0
-0.5
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.0
-0.3
-0.8
-0.8
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.8
-0.4
-0.7
-0.8
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
-2.6
+0.1
-0.3
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.2
+0.3
-1.1
-0.4
-0.3
mgl
MGL
-1.7
+0.5
-0.5
-0.6
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.5
+0.3
-1.0
-0.2
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
+1.0
+0.6
+0.8
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
+1.4
+0.8
+1.0
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.9
+0.8
+0.6
+0.7
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+1.4
+0.5
+0.8
+0.5
+0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+1.3
+0.9
+1.0
+0.6
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.6
+1.3
+1.0
+1.2
+0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+1.0
+1.2
+1.1
+1.2
+0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.7
+1.5
+1.2
+1.4
+0.8
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