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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04084 and MPMX19_04085 are separated by 167 nucleotides
MPMX19_04085 and MPMX19_04086 overlap by 4 nucleotides
MPMX19_04086 and MPMX19_04087 are separated by 19 nucleotides
MPMX19_04087 and MPMX19_04088 overlap by 4 nucleotides
MPMX19_04084: MPMX19_04084 - hypothetical protein, at 387,592 to 388,041
_04084
MPMX19_04085: MPMX19_04085 - hypothetical protein, at 388,209 to 388,562
_04085
MPMX19_04086: MPMX19_04086 - hypothetical protein, at 388,559 to 390,463
_04086
MPMX19_04087: MPMX19_04087 - Flagellum site-determining protein YlxH, at 390,483 to 391,280
_04087
MPMX19_04088: MPMX19_04088 - Signal recognition particle 54 kDa protein, at 391,277 to 392,557
_04088
Group
Condition
MPMX19
_04084
MPMX19
_04085
MPMX19
_04086
MPMX19
_04087
MPMX19
_04088
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
-0.2
+0.2
-2.6
+0.1
mgl
MGL
-0.6
-1.7
-0.6
-1.0
+1.0
nl-ccm_agar
NL-CCM_agar
-0.4
-0.2
-0.3
-1.6
-0.3
nl-ccm_agar
NL-CCM_agar
-0.3
-0.4
-0.1
-1.5
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.6
+0.2
-2.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.4
-0.1
-2.6
+0.6
nl-ccm_agar
NL-CCM_agar
-0.3
+0.1
-0.2
-1.7
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.3
-0.2
-2.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.0
+0.0
-0.0
-1.7
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
-0.3
-0.1
-2.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.3
-0.2
-2.0
+0.5
mgl
MGL
-0.2
-1.3
+0.2
-1.1
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.4
+0.1
-2.0
+0.4
nln
NLN
-0.1
+0.5
-0.0
-1.7
-0.4
mgl
MGL
-0.4
-0.5
+0.1
-1.2
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.5
+0.2
+0.2
-1.7
+0.2
nl-ccm_agar
NL-CCM_agar
-0.1
+0.5
-0.1
-1.1
-0.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
+0.5
+0.0
-2.1
+0.2
mgl
MGL
+0.0
+0.5
-0.5
-1.7
+0.5
nln
NLN
-0.2
+0.4
-0.3
-1.2
+0.3
nf
NF
+0.2
+0.4
-0.3
-1.6
+0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.5
+0.1
-1.7
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
-0.8
-0.4
+1.4
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-1.3
-0.3
+0.8
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.4
-0.8
+0.6
+0.7
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.5
-0.0
+0.7
+1.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
+0.0
-0.4
+1.0
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.6
-0.0
+0.1
+1.0
+1.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.5
-0.2
+0.6
+1.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.3
+0.2
+0.7
+1.5
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