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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04079 and MPMX19_04080 are separated by 215 nucleotides
MPMX19_04080 and MPMX19_04081 are separated by 12 nucleotides
MPMX19_04081 and MPMX19_04082 are separated by 24 nucleotides
MPMX19_04082 and MPMX19_04083 overlap by 4 nucleotides
MPMX19_04079: MPMX19_04079 - hypothetical protein, at 385,460 to 385,783
_04079
MPMX19_04080: MPMX19_04080 - hypothetical protein, at 385,999 to 386,433
_04080
MPMX19_04081: MPMX19_04081 - hypothetical protein, at 386,446 to 386,577
_04081
MPMX19_04082: MPMX19_04082 - hypothetical protein, at 386,602 to 387,138
_04082
MPMX19_04083: MPMX19_04083 - Cytochrome c-type protein SHP, at 387,135 to 387,581
_04083
Group
Condition
MPMX19
_04079
MPMX19
_04080
MPMX19
_04081
MPMX19
_04082
MPMX19
_04083
mgl
MGL
-2.5
N.D.
+0.0
-0.5
-0.8
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-2.7
N.D.
-0.1
+0.2
+0.1
mgl
MGL
-0.4
N.D.
-1.5
+0.4
-0.9
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.2
N.D.
-0.4
-0.4
+0.0
nln
NLN
-0.8
N.D.
-0.8
+0.0
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
N.D.
-0.8
-0.1
-0.8
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
N.D.
-0.9
-0.1
-0.7
nl-ccm
NL-CCM, start OD=0.3
-1.9
N.D.
+0.3
+0.3
-0.2
nl-ccm
NL-CCM, start OD=0.1
-0.4
N.D.
-1.1
+0.1
-0.1
nf_with_fulln
NF_with_fullN
-1.3
N.D.
-0.2
+0.0
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.8
N.D.
-0.6
+0.2
-0.2
nl-ccm
NL-CCM, start OD=0.1
-1.3
N.D.
+0.1
+0.2
-0.1
mgl
MGL
-0.3
N.D.
-0.3
+0.2
-0.7
nf_with_fulln
NF_with_fullN
+0.6
N.D.
-0.7
+0.0
-0.9
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.9
N.D.
+0.2
+0.4
-0.7
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
N.D.
-1.2
-0.0
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.6
N.D.
-0.3
+0.3
-0.4
nl-ccm_agar
NL-CCM_agar
-1.3
N.D.
+0.2
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.8
N.D.
-0.6
+0.3
+0.3
nln
NLN
-1.1
N.D.
+0.3
+0.2
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.8
N.D.
-0.3
+0.3
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.9
N.D.
+0.2
-0.2
+0.3
nf_with_fulln
NF_with_fullN
-0.6
N.D.
+0.5
+0.2
-0.4
nl-ccm_agar
NL-CCM_agar
-0.9
N.D.
+0.5
+0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
N.D.
-0.8
-0.4
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
N.D.
-0.1
-0.0
-0.8
nln
NLN
-1.1
N.D.
+0.2
+0.5
+0.6
nl-ccm_agar
NL-CCM_agar
-0.1
N.D.
+1.0
+0.2
+0.3
mgl
MGL
+0.7
N.D.
+0.4
-0.2
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
N.D.
+0.9
+0.2
-0.1
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