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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04071 and MPMX19_04072 are separated by 324 nucleotides
MPMX19_04072 and MPMX19_04073 are separated by 209 nucleotides
MPMX19_04073 and MPMX19_04074 are separated by 294 nucleotides
MPMX19_04074 and MPMX19_04075 are separated by 87 nucleotides
MPMX19_04071: MPMX19_04071 - Catabolite control protein A, at 376,297 to 377,316
_04071
MPMX19_04072: MPMX19_04072 - tRNA-Arg, at 377,641 to 377,717
_04072
MPMX19_04073: MPMX19_04073 - hypothetical protein, at 377,927 to 379,399
_04073
MPMX19_04074: MPMX19_04074 - Pyruvate kinase, at 379,694 to 381,193
_04074
MPMX19_04075: MPMX19_04075 - Aldose 1-epimerase, at 381,281 to 382,366
_04075
Group
Condition
MPMX19
_04071
MPMX19
_04072
MPMX19
_04073
MPMX19
_04074
MPMX19
_04075
mgl
MGL
-0.3
N.D.
-0.1
-0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
N.D.
-0.1
-0.3
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
N.D.
+0.1
-0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
N.D.
-0.3
-0.3
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
N.D.
-0.1
-0.4
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
N.D.
+0.1
-0.1
+0.0
mgl
MGL
-0.3
N.D.
-0.1
-0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
N.D.
-0.3
-0.0
+0.1
mgl
MGL
+0.3
N.D.
-0.5
-0.0
+0.0
mgl
MGL
-0.5
N.D.
+0.0
+0.2
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
N.D.
+0.1
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
N.D.
+0.2
-0.1
-0.0
nl-ccm_agar
NL-CCM_agar
-0.2
N.D.
+0.2
-0.2
+0.2
nl-ccm_agar
NL-CCM_agar
-0.2
N.D.
+0.1
+0.2
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
N.D.
+0.1
-0.1
+0.2
nln
NLN
-0.2
N.D.
+0.1
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
N.D.
+0.1
-0.1
+0.2
nf
NF
-0.2
N.D.
+0.0
+0.2
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
N.D.
+0.1
-0.0
+0.2
mgl
MGL
+0.1
N.D.
+0.1
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
N.D.
+0.3
+0.2
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
N.D.
+0.2
-0.1
+0.1
nl-ccm_agar
NL-CCM_agar
-0.1
N.D.
+0.2
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.0
N.D.
+0.2
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
N.D.
+0.0
+0.3
+0.2
nf_with_fulln
NF_with_fullN
+0.2
N.D.
+0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
N.D.
+0.2
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
N.D.
+0.1
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.1
N.D.
+0.3
+0.2
+0.2
nf_with_fulln
NF_with_fullN
+0.4
N.D.
+0.2
+0.3
+0.0
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