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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04053 and MPMX19_04054 overlap by 11 nucleotides
MPMX19_04054 and MPMX19_04055 are separated by 152 nucleotides
MPMX19_04055 and MPMX19_04056 are separated by 139 nucleotides
MPMX19_04056 and MPMX19_04057 overlap by 4 nucleotides
MPMX19_04053: MPMX19_04053 - Transcriptional regulatory protein OmpR, at 356,544 to 357,293
_04053
MPMX19_04054: MPMX19_04054 - Adaptive-response sensory-kinase SasA, at 357,283 to 358,728
_04054
MPMX19_04055: MPMX19_04055 - 2,5-diketo-D-gluconic acid reductase B, at 358,881 to 359,705
_04055
MPMX19_04056: MPMX19_04056 - Aldehyde oxidoreductase molybdenum-binding subunit PaoC, at 359,845 to 362,130
_04056
MPMX19_04057: MPMX19_04057 - Aldehyde oxidoreductase FAD-binding subunit PaoB, at 362,127 to 363,116
_04057
Group
Condition
MPMX19
_04053
MPMX19
_04054
MPMX19
_04055
MPMX19
_04056
MPMX19
_04057
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-0.2
-0.2
-0.2
-0.0
mgl
MGL
-0.3
+0.1
-0.5
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.4
-0.1
-0.0
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.5
-0.0
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
+0.0
-0.5
+0.1
mgl
MGL
-0.4
-0.4
+0.2
+0.1
-0.1
nln
NLN
-0.8
-0.2
+0.2
+0.1
+0.1
mgl
MGL
-0.7
+0.2
+0.3
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.7
+0.1
+0.2
+0.2
-0.1
nl-ccm
NL-CCM, start OD=0.3
-0.3
+0.0
+0.3
+0.3
-0.3
nl-ccm_agar
NL-CCM_agar
+0.1
-0.3
+0.1
+0.3
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
+0.0
+0.0
+0.4
+0.1
mgl
MGL
+0.3
-0.2
+0.1
-0.2
+0.3
nl-ccm_agar
NL-CCM_agar
-0.1
+0.1
+0.1
+0.4
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
+0.2
+0.1
+0.2
+0.1
nl-ccm_agar
NL-CCM_agar
-0.4
+0.1
+0.2
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.4
+0.1
+0.1
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.2
+0.1
+0.4
+0.0
mgl
MGL
+0.4
-0.2
+0.2
-0.2
+0.3
nf
NF
+0.5
-0.1
+0.1
+0.4
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.1
+0.3
+0.2
-0.0
nl-ccm_agar
NL-CCM_agar
+0.2
+0.2
+0.2
+0.4
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.2
+0.1
+0.3
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.5
+0.4
-0.1
+0.1
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.5
+0.0
+0.2
+0.1
+0.1
nln
NLN
+0.5
+0.2
+0.2
+0.2
-0.1
nln
NLN
+0.2
+0.2
+0.3
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.2
+0.2
+0.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
+0.4
+0.2
+0.4
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.2
-0.0
+0.2
+0.3
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