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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04021 and MPMX19_04022 are separated by 200 nucleotides
MPMX19_04022 and MPMX19_04023 are separated by 144 nucleotides
MPMX19_04023 and MPMX19_04024 are separated by 338 nucleotides
MPMX19_04024 and MPMX19_04025 are separated by 105 nucleotides
MPMX19_04021: MPMX19_04021 - Dipeptide transport system permease protein DppB, at 316,845 to 317,786
_04021
MPMX19_04022: MPMX19_04022 - hypothetical protein, at 317,987 to 319,561
_04022
MPMX19_04023: MPMX19_04023 - HTH-type transcriptional regulator XynR, at 319,706 to 320,506
_04023
MPMX19_04024: MPMX19_04024 - hypothetical protein, at 320,845 to 321,051
_04024
MPMX19_04025: MPMX19_04025 - hypothetical protein, at 321,157 to 321,384
_04025
Group
Condition
MPMX19
_04021
MPMX19
_04022
MPMX19
_04023
MPMX19
_04024
MPMX19
_04025
mgl
MGL
-0.0
+0.1
-0.6
N.D.
-1.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.1
-0.3
N.D.
-0.6
mgl
MGL
-0.1
-0.1
-0.5
N.D.
-0.3
nl-ccm_agar
NL-CCM_agar
-0.2
-0.0
-0.6
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.1
-0.4
N.D.
-0.3
mgl
MGL
-0.3
-0.2
-0.3
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.0
-0.3
N.D.
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.1
-0.4
N.D.
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.3
+0.2
-0.5
N.D.
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
-0.1
-0.5
N.D.
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.0
-0.5
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.0
-0.6
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
-0.1
-0.3
N.D.
+0.3
nl-ccm_agar
NL-CCM_agar
-0.1
+0.0
-0.5
N.D.
+0.4
nl-ccm_agar
NL-CCM_agar
+0.0
-0.0
-0.4
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.1
-0.5
N.D.
+0.5
nl-ccm
NL-CCM, start OD=0.3
+0.1
+0.1
-0.5
N.D.
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.1
-0.3
N.D.
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.1
-0.2
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.1
-0.3
N.D.
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.0
-0.3
N.D.
+0.4
nln
NLN
-0.1
+0.0
-0.3
N.D.
+0.5
nln
NLN
-0.1
+0.0
-0.2
N.D.
+0.4
nf_with_fulln
NF_with_fullN
-0.4
+0.1
-0.0
N.D.
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.1
+0.5
N.D.
-0.2
nf_with_fulln
NF_with_fullN
+0.1
+0.1
+0.1
N.D.
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.0
+0.3
N.D.
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.0
+0.6
N.D.
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.0
+0.6
N.D.
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.0
+0.4
N.D.
+0.7
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