Fitness for 5 genes in Azospirillum sp. SherDot2

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Top 30 experiments (either direction), sorted by average fitness

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500 ntMPMX19_04016 and MPMX19_04017 are separated by 35 nucleotidesMPMX19_04017 and MPMX19_04018 are separated by 78 nucleotidesMPMX19_04018 and MPMX19_04019 are separated by 22 nucleotidesMPMX19_04019 and MPMX19_04020 are separated by 1 nucleotides MPMX19_04016: MPMX19_04016 - Oligopeptide transport ATP-binding protein OppD, at 311,733 to 312,737 _04016 MPMX19_04017: MPMX19_04017 - D-threonine aldolase, at 312,773 to 313,831 _04017 MPMX19_04018: MPMX19_04018 - 2-aminomuconate deaminase, at 313,910 to 314,293 _04018 MPMX19_04019: MPMX19_04019 - N-acyl-D-glutamate deacylase, at 314,316 to 315,920 _04019 MPMX19_04020: MPMX19_04020 - putative D,D-dipeptide transport system permease protein DdpC, at 315,922 to 316,830 _04020
Group Condition MPMX19_04016 MPMX19_04017 MPMX19_04018 MPMX19_04019 MPMX19_04020
mgl MGL -0.5 -0.3 -0.1 +0.0 -0.7
mgl MGL -0.0 -0.0 -0.5 +0.1 -0.8
nf_with10percent_fulln NF_with10percent_fullN +0.0 -0.2 -0.1 -0.1 -0.7
mgl MGL +0.1 -0.1 -0.3 -0.1 -0.5
mgl MGL -0.4 +0.2 -0.1 -0.4 -0.0
nln NLN -0.0 -0.0 -0.2 -0.1 -0.3
nl-ccm; spin-x control NL-CCM; spin-x control -0.0 +0.1 -0.2 -0.2 -0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 -0.2 -0.3 +0.1 -0.3
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 +0.1 -0.3 -0.0 -0.3
nln NLN -0.1 -0.0 -0.3 +0.0 -0.2
nl-ccm; spin-x control NL-CCM; spin-x control -0.0 -0.1 -0.3 +0.1 -0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 +0.1 -0.4 -0.1 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.3 -0.0 -0.2 -0.1 +0.0
nl-ccm; high oxygen NL-CCM; high oxygen -0.0 +0.1 -0.3 +0.0 -0.3
nl-ccm; low oxygen NL-CCM; low oxygen -0.1 +0.2 -0.2 -0.2 -0.1
nf_with_fulln NF_with_fullN -0.1 +0.2 -0.3 +0.1 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.2 +0.2 -0.2 +0.1 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 +0.2 -0.2 +0.0 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.3 -0.0 -0.1 +0.1 +0.1
nl-ccm NL-CCM, start OD=0.1 +0.1 +0.2 -0.2 +0.1 -0.4
mgl MGL +0.3 -0.0 -0.2 -0.5 +0.4
nl-ccm; spin-x control NL-CCM; spin-x control -0.1 -0.0 +0.1 +0.2 -0.2
nl-ccm NL-CCM, start OD=0.1 +0.3 +0.2 -0.1 +0.1 -0.3
nln NLN -0.2 +0.1 -0.1 +0.1 +0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.1 +0.1 -0.1 +0.2 +0.2
nf_with10percent_fulln NF_with10percent_fullN +0.1 +0.3 -0.0 +0.1 -0.1
nf_with_fulln NF_with_fullN +0.0 +0.1 +0.0 -0.2 +0.4
nf_with_fulln NF_with_fullN -0.1 +0.3 -0.0 +0.2 +0.1
nf_with10percent_fulln NF_with10percent_fullN +0.1 -0.1 +0.4 +0.0 +0.2
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.3 +0.3 -0.3 +0.3
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