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Gene
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Cofit
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03980 and MPMX19_03981 are separated by 49 nucleotides
MPMX19_03981 and MPMX19_03982 are separated by 282 nucleotides
MPMX19_03982 and MPMX19_03983 are separated by 394 nucleotides
MPMX19_03983 and MPMX19_03984 are separated by 1360 nucleotides
MPMX19_03980: MPMX19_03980 - Sensor protein FixL, at 271,353 to 273,155
_03980
MPMX19_03981: MPMX19_03981 - hypothetical protein, at 273,205 to 273,441
_03981
MPMX19_03982: MPMX19_03982 - tRNA-Ser, at 273,724 to 273,816
_03982
MPMX19_03983: MPMX19_03983 - hypothetical protein, at 274,211 to 274,669
_03983
MPMX19_03984: MPMX19_03984 - hypothetical protein, at 276,030 to 276,299
_03984
Group
Condition
MPMX19
_03980
MPMX19
_03981
MPMX19
_03982
MPMX19
_03983
MPMX19
_03984
nf_with_fulln
NF_with_fullN
-0.2
N.D.
N.D.
-0.4
-0.8
nf_with_fulln
NF_with_fullN
-0.2
N.D.
N.D.
-0.3
-0.7
nf_with_fulln
NF_with_fullN
+0.1
N.D.
N.D.
-0.5
-0.6
nf_with_fulln
NF_with_fullN
-0.0
N.D.
N.D.
-0.4
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
N.D.
N.D.
-0.1
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
N.D.
N.D.
-0.0
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
N.D.
N.D.
-0.1
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
N.D.
-0.1
-0.4
nf_with_fulln
NF_with_fullN
-0.0
N.D.
N.D.
-0.4
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
N.D.
N.D.
-0.2
-0.4
nln
NLN
-0.1
N.D.
N.D.
-0.2
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-0.1
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-0.2
-0.2
nl-ccm_agar
NL-CCM_agar
-0.3
N.D.
N.D.
-0.1
-0.1
nln
NLN
-0.0
N.D.
N.D.
-0.1
-0.3
mgl
MGL
-0.2
N.D.
N.D.
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
N.D.
N.D.
-0.0
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
N.D.
N.D.
-0.2
+0.3
nln
NLN
-0.1
N.D.
N.D.
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
-0.2
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
N.D.
-0.2
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
N.D.
N.D.
-0.2
+0.6
nl-ccm_agar
NL-CCM_agar
-0.2
N.D.
N.D.
-0.1
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
N.D.
N.D.
-0.1
+0.3
mgl
MGL
-0.2
N.D.
N.D.
-0.1
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
-0.0
+0.4
mgl
MGL
-0.1
N.D.
N.D.
+0.1
+0.3
mgl
MGL
-0.1
N.D.
N.D.
-0.0
+0.5
mgl
MGL
-0.0
N.D.
N.D.
+0.3
+0.2
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