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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03949 and MPMX19_03950 are separated by 77 nucleotides
MPMX19_03950 and MPMX19_03951 are separated by 152 nucleotides
MPMX19_03951 and MPMX19_03952 overlap by 1 nucleotides
MPMX19_03952 and MPMX19_03953 are separated by 11 nucleotides
MPMX19_03949: MPMX19_03949 - hypothetical protein, at 236,188 to 236,757
_03949
MPMX19_03950: MPMX19_03950 - Acetyl-coenzyme A synthetase, at 236,835 to 238,643
_03950
MPMX19_03951: MPMX19_03951 - Lipopolysaccharide export system ATP-binding protein LptB, at 238,796 to 239,689
_03951
MPMX19_03952: MPMX19_03952 - Long-chain-fatty-acid--CoA ligase FadD15, at 239,689 to 241,653
_03952
MPMX19_03953: MPMX19_03953 - High-affinity branched-chain amino acid transport system permease protein LivH, at 241,665 to 242,552
_03953
Group
Condition
MPMX19
_03949
MPMX19
_03950
MPMX19
_03951
MPMX19
_03952
MPMX19
_03953
mgl
MGL
-0.8
+0.0
-0.2
-0.0
-0.2
nln
NLN
-0.6
-0.1
-0.2
-0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
-0.2
+0.0
+0.0
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.5
-0.0
-0.1
-0.1
+0.0
nln
NLN
-0.5
+0.0
-0.1
-0.1
-0.1
nl-ccm_agar
NL-CCM_agar
-0.3
-0.0
-0.1
-0.2
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
-0.0
+0.1
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
-0.1
-0.1
-0.1
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
-0.1
-0.1
-0.0
+0.1
nln
NLN
-0.6
-0.2
+0.1
-0.0
+0.2
nln
NLN
-0.4
-0.1
+0.1
-0.1
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.2
-0.2
+0.0
-0.0
mgl
MGL
-0.2
-0.2
-0.1
-0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.2
-0.1
+0.0
+0.1
mgl
MGL
-0.5
-0.2
+0.1
+0.0
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
-0.0
-0.0
-0.4
nl-ccm_agar
NL-CCM_agar
-0.5
-0.1
+0.1
-0.0
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.1
+0.2
-0.0
-0.3
nln
NLN
-0.2
+0.0
+0.1
-0.0
-0.2
nf_with_fulln
NF_with_fullN
-0.1
+0.1
-0.3
-0.1
+0.1
mgl
MGL
-0.0
-0.2
+0.1
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.6
+0.0
+0.2
-0.0
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.1
-0.1
+0.0
+0.2
nf_with_fulln
NF_with_fullN
-0.2
-0.1
-0.2
-0.1
+0.4
nl-ccm_agar
NL-CCM_agar
-0.5
-0.0
+0.2
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.2
+0.1
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
+0.0
+0.0
+0.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.1
+0.1
+0.0
+0.3
nl-ccm
NL-CCM, start OD=0.3
-0.1
+0.1
+0.2
-0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.2
+0.2
-0.0
+0.4
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