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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03925 and MPMX19_03926 are separated by 5 nucleotides
MPMX19_03926 and MPMX19_03927 are separated by 75 nucleotides
MPMX19_03927 and MPMX19_03928 are separated by 121 nucleotides
MPMX19_03928 and MPMX19_03929 are separated by 28 nucleotides
MPMX19_03925: MPMX19_03925 - L-methionine sulfoximine/L-methionine sulfone acetyltransferase, at 203,345 to 203,890
_03925
MPMX19_03926: MPMX19_03926 - hypothetical protein, at 203,896 to 205,149
_03926
MPMX19_03927: MPMX19_03927 - HTH-type transcriptional activator CmpR, at 205,225 to 206,112
_03927
MPMX19_03928: MPMX19_03928 - Sensor histidine kinase RcsC, at 206,234 to 208,693
_03928
MPMX19_03929: MPMX19_03929 - hypothetical protein, at 208,722 to 209,450
_03929
Group
Condition
MPMX19
_03925
MPMX19
_03926
MPMX19
_03927
MPMX19
_03928
MPMX19
_03929
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-0.2
-0.1
+0.1
-0.9
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.2
+0.3
-0.3
-1.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
+0.1
-0.4
-0.0
-0.8
mgl
MGL
-0.3
-0.4
+0.0
-0.4
-0.1
nl-ccm_agar
NL-CCM_agar
-0.1
-0.0
-0.1
-0.1
-0.7
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.1
+0.2
-0.2
-0.8
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.0
-0.4
-0.3
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
-0.1
-0.2
-0.7
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.0
+0.4
+0.0
-1.0
mgl
MGL
+0.1
-0.1
+0.2
-0.3
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.1
-0.2
+0.0
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
+0.0
+0.2
-0.1
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.3
+0.0
+0.1
-0.4
nf_with_fulln
NF_with_fullN
+0.1
+0.2
+0.1
+0.1
-0.7
nln
NLN
-0.1
+0.0
+0.3
+0.1
-0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.2
-0.1
-0.3
-0.3
mgl
MGL
-0.3
-0.0
+0.4
-0.3
+0.1
nl-ccm_agar
NL-CCM_agar
+0.1
+0.1
+0.2
-0.2
-0.2
mgl
MGL
-0.3
-0.2
+0.6
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.2
-0.3
+0.1
+0.0
nf_with_fulln
NF_with_fullN
-0.1
+0.2
+0.3
+0.1
-0.3
nl-ccm
NL-CCM, start OD=0.3
+0.0
+0.2
+0.0
-0.4
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.1
-0.2
+0.3
nf_with_fulln
NF_with_fullN
+0.2
+0.3
+0.2
+0.0
-0.3
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.2
+0.3
-0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.0
+0.4
+0.2
+0.1
-0.3
nl-ccm
NL-CCM, start OD=0.3
-0.0
+0.2
+0.3
-0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
+0.1
+0.3
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.1
+0.3
+0.0
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.1
+0.3
+0.1
+0.5
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