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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03915 and MPMX19_03916 are separated by 74 nucleotides
MPMX19_03916 and MPMX19_03917 overlap by 8 nucleotides
MPMX19_03917 and MPMX19_03918 overlap by 37 nucleotides
MPMX19_03918 and MPMX19_03919 are separated by 258 nucleotides
MPMX19_03915: MPMX19_03915 - hypothetical protein, at 193,386 to 194,351
_03915
MPMX19_03916: MPMX19_03916 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 194,426 to 195,076
_03916
MPMX19_03917: MPMX19_03917 - putative 2-dehydro-3-deoxygalactonokinase DgoK1, at 195,069 to 196,088
_03917
MPMX19_03918: MPMX19_03918 - DNA-binding transcriptional repressor YiaJ, at 196,052 to 196,906
_03918
MPMX19_03919: MPMX19_03919 - Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase, at 197,165 to 197,941
_03919
Group
Condition
MPMX19
_03915
MPMX19
_03916
MPMX19
_03917
MPMX19
_03918
MPMX19
_03919
nf_with_fulln
NF_with_fullN
-0.7
-0.6
-0.1
-0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-1.4
-0.0
+0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
-0.2
-0.4
-0.1
+0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.8
+0.1
+0.0
+0.1
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.2
-0.6
-0.3
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.6
-0.1
+0.2
-0.5
mgl
MGL
-0.7
+0.6
-0.4
+0.1
-0.2
mgl
MGL
+0.3
-1.1
-0.1
-0.1
+0.4
nln
NLN
+0.4
-1.0
+0.2
+0.2
-0.1
mgl
MGL
-0.6
+0.9
-0.2
-0.3
-0.2
nln
NLN
+0.3
-0.9
+0.1
-0.1
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.7
+0.4
-0.0
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
+0.4
+0.1
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.7
+0.2
+0.2
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
+0.7
-0.0
-0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.7
+0.6
+0.1
+0.1
-0.2
mgl
MGL
-0.1
+0.4
-0.3
-0.2
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
+0.5
-0.1
+0.1
-0.1
mgl
MGL
-0.3
+0.8
-0.2
-0.0
-0.0
nf
NF
-0.4
+0.7
-0.1
-0.0
+0.0
nln
NLN
-0.4
+0.5
+0.1
+0.1
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.7
+0.1
+0.2
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.5
-0.1
-0.3
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.5
+0.5
+0.1
+0.2
-0.5
nf_with_fulln
NF_with_fullN
+0.2
+0.7
+0.1
-0.1
-0.1
nf
NF
+0.3
+0.7
+0.2
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.8
+0.1
+0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.8
+0.2
+0.1
-0.2
nl-ccm
NL-CCM, start OD=0.3
+0.4
+0.8
-0.0
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.6
+0.2
-0.1
+0.2
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