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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03909 and MPMX19_03910 overlap by 4 nucleotides
MPMX19_03910 and MPMX19_03911 are separated by 58 nucleotides
MPMX19_03911 and MPMX19_03912 are separated by 111 nucleotides
MPMX19_03912 and MPMX19_03913 overlap by 4 nucleotides
MPMX19_03909: MPMX19_03909 - Vitamin B12 import ATP-binding protein BtuD, at 185,767 to 186,873
_03909
MPMX19_03910: MPMX19_03910 - hypothetical protein, at 186,870 to 188,633
_03910
MPMX19_03911: MPMX19_03911 - Crotonobetaine/carnitine--CoA ligase, at 188,692 to 190,230
_03911
MPMX19_03912: MPMX19_03912 - 6-deoxy-6-sulfogluconolactonase, at 190,342 to 191,256
_03912
MPMX19_03913: MPMX19_03913 - hypothetical protein, at 191,253 to 192,770
_03913
Group
Condition
MPMX19
_03909
MPMX19
_03910
MPMX19
_03911
MPMX19
_03912
MPMX19
_03913
mgl
MGL
-0.1
-0.0
+0.1
-0.9
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.3
-0.2
-0.1
-0.2
mgl
MGL
-0.3
+0.2
-0.2
-0.2
+0.1
nl-ccm_agar
NL-CCM_agar
+0.1
+0.1
-0.4
-0.2
+0.0
nf
NF
+0.1
+0.0
-0.2
-0.2
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
+0.3
-0.2
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.1
-0.2
-0.4
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.2
-0.2
-0.4
+0.1
mgl
MGL
-0.2
+0.1
-0.0
+0.2
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.2
-0.1
-0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.3
+0.3
-0.1
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.2
-0.3
-0.1
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.1
-0.2
+0.2
-0.2
mgl
MGL
-0.4
+0.0
+0.1
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.1
-0.2
-0.3
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.1
-0.3
+0.3
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.3
-0.0
-0.4
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.3
+0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.2
-0.0
+0.2
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.2
-0.0
-0.2
+0.1
nf
NF
+0.1
+0.3
-0.3
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.2
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.3
-0.1
-0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.1
+0.1
-0.3
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.2
-0.1
+0.2
-0.1
nln
NLN
+0.2
+0.1
-0.2
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.2
+0.3
-0.0
nl-ccm_agar
NL-CCM_agar
+0.1
+0.3
-0.2
+0.1
+0.1
nf_with_fulln
NF_with_fullN
+0.1
+0.0
+0.1
+0.4
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.3
-0.0
+0.2
+0.1
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