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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03903 and MPMX19_03904 are separated by 43 nucleotides
MPMX19_03904 and MPMX19_03905 overlap by 4 nucleotides
MPMX19_03905 and MPMX19_03906 are separated by 80 nucleotides
MPMX19_03906 and MPMX19_03907 are separated by 202 nucleotides
MPMX19_03903: MPMX19_03903 - Maleylacetate reductase, at 178,564 to 179,652
_03903
MPMX19_03904: MPMX19_03904 - Sialic acid-binding periplasmic protein SiaP, at 179,696 to 180,733
_03904
MPMX19_03905: MPMX19_03905 - Sialic acid TRAP transporter permease protein SiaT, at 180,730 to 182,604
_03905
MPMX19_03906: MPMX19_03906 - Pca regulon regulatory protein, at 182,685 to 183,542
_03906
MPMX19_03907: MPMX19_03907 - Short-chain-enoyl-CoA hydratase, at 183,745 to 184,521
_03907
Group
Condition
MPMX19
_03903
MPMX19
_03904
MPMX19
_03905
MPMX19
_03906
MPMX19
_03907
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.1
-4.9
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.1
+0.1
-4.6
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.0
-0.2
-4.6
-0.3
nl-ccm_agar
NL-CCM_agar
-0.0
-0.0
-0.1
-4.5
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.1
+0.1
-4.5
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.0
-0.2
-4.4
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.1
-0.1
-4.3
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.1
+0.1
-4.4
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.1
+0.1
-4.4
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.0
-4.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.0
-0.1
-4.3
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
-0.2
-4.3
-0.2
nl-ccm_agar
NL-CCM_agar
+0.1
-0.0
-0.2
-3.8
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.1
+0.0
-4.0
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.0
+0.0
-4.2
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
-0.1
+0.1
-4.7
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
-0.0
-4.1
-0.3
nl-ccm_agar
NL-CCM_agar
+0.1
-0.0
-0.2
-3.8
-0.3
nl-ccm_agar
NL-CCM_agar
-0.1
+0.0
-0.0
-3.4
-0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.2
-0.0
-4.3
-0.2
nln
NLN
+0.1
-0.1
-0.1
-3.9
-0.1
nln
NLN
+0.1
-0.1
-0.0
-4.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.1
+0.2
-4.0
-0.1
nln
NLN
+0.1
+0.1
+0.0
-3.9
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.1
+0.1
-4.2
+0.3
nl-ccm_agar
NL-CCM_agar
+0.0
+0.0
-0.0
-3.6
-0.1
nl-ccm_agar
NL-CCM_agar
+0.1
-0.1
-0.0
-3.6
-0.1
nln
NLN
+0.1
-0.1
+0.2
-3.7
-0.0
nln
NLN
+0.0
-0.1
+0.1
-3.8
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-0.1
+0.1
-3.5
+0.1
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