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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03734 and MPMX19_03735 are separated by 154 nucleotides
MPMX19_03735 and MPMX19_03736 are separated by 68 nucleotides
MPMX19_03736 and MPMX19_03737 are separated by 290 nucleotides
MPMX19_03737 and MPMX19_03738 are separated by 153 nucleotides
MPMX19_03734: MPMX19_03734 - RutC family protein YjgH, at 1,178,964 to 1,179,362
_03734
MPMX19_03735: MPMX19_03735 - Transposon Tn10 TetC protein, at 1,179,517 to 1,180,113
_03735
MPMX19_03736: MPMX19_03736 - Cytochrome c2, at 1,180,182 to 1,180,568
_03736
MPMX19_03737: MPMX19_03737 - HTH-type transcriptional regulator HdfR, at 1,180,859 to 1,181,722
_03737
MPMX19_03738: MPMX19_03738 - hypothetical protein, at 1,181,876 to 1,182,097
_03738
Group
Condition
MPMX19
_03734
MPMX19
_03735
MPMX19
_03736
MPMX19
_03737
MPMX19
_03738
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-2.5
-0.1
-0.1
-0.2
-0.8
mgl
MGL
-2.1
-0.7
-0.1
-0.5
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-2.2
-0.4
-0.1
-0.5
+0.0
nln
NLN
-3.1
+0.2
-0.0
+0.1
+0.0
nf
NF
-2.7
+0.4
+0.1
+0.0
-0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.7
-0.6
+0.0
-0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.9
+0.0
-0.1
+0.0
-0.2
nl-ccm_agar
NL-CCM_agar
-1.9
-0.1
+0.2
+0.0
-0.3
mgl
MGL
-2.5
+0.4
-0.0
+0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-2.2
+0.2
-0.6
+0.4
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
-0.3
-0.6
-0.3
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.5
-0.0
-0.2
-0.2
+0.2
nl-ccm_agar
NL-CCM_agar
-0.8
-0.5
+0.0
-0.2
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.2
-0.2
+0.2
-0.1
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.7
-0.1
-0.1
+0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.8
-0.2
-0.3
-0.2
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.3
-0.1
-0.2
-0.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.1
-0.1
+0.1
-0.3
-0.1
nf
NF
-1.7
+0.5
-0.0
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-1.4
-0.3
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.1
+0.3
-0.1
-0.2
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-1.3
+0.6
-0.2
-0.3
-0.0
nl-ccm
NL-CCM, start OD=0.3
-0.6
+0.1
-0.1
+0.2
-0.7
nl-ccm; high oxygen
NL-CCM; high oxygen
-1.1
+0.1
+0.2
-0.1
+0.1
nf_with_fulln
NF_with_fullN
-1.1
+0.2
+0.1
+0.3
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.6
-0.5
-0.0
-0.2
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+1.2
-0.5
+0.1
-0.6
-0.1
nf_with_fulln
NF_with_fullN
+0.8
-0.4
+0.1
+0.1
-0.3
nf_with_fulln
NF_with_fullN
+0.8
-0.6
-0.2
+0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+1.6
-0.8
+0.5
-0.1
+0.3
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