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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03687 and MPMX19_03688 overlap by 4 nucleotides
MPMX19_03688 and MPMX19_03689 are separated by 6 nucleotides
MPMX19_03689 and MPMX19_03690 are separated by 69 nucleotides
MPMX19_03690 and MPMX19_03691 are separated by 78 nucleotides
MPMX19_03687: MPMX19_03687 - hypothetical protein, at 1,127,706 to 1,129,040
_03687
MPMX19_03688: MPMX19_03688 - Response regulator UvrY, at 1,129,037 to 1,129,669
_03688
MPMX19_03689: MPMX19_03689 - Transcriptional regulator MntR, at 1,129,676 to 1,130,158
_03689
MPMX19_03690: MPMX19_03690 - Divalent metal cation transporter MntH, at 1,130,228 to 1,131,586
_03690
MPMX19_03691: MPMX19_03691 - hypothetical protein, at 1,131,665 to 1,132,102
_03691
Group
Condition
MPMX19
_03687
MPMX19
_03688
MPMX19
_03689
MPMX19
_03690
MPMX19
_03691
mgl
MGL
-0.9
-0.5
-0.3
+0.1
-0.2
mgl
MGL
-0.8
-0.3
+0.1
-0.1
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
-0.7
-0.4
-0.0
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-0.5
-0.1
-0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.5
-0.1
-0.5
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.1
-0.3
-0.1
-0.6
mgl
MGL
-0.2
-0.8
+0.1
+0.2
-0.5
mgl
MGL
+0.2
-0.4
-0.7
-0.0
-0.3
nln
NLN
-0.3
-0.6
-0.0
+0.2
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
-0.0
-0.4
-0.5
+0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.5
+0.0
-0.3
-0.2
mgl
MGL
-0.5
-0.5
-0.1
+0.1
-0.0
nl-ccm
NL-CCM, start OD=0.1
+0.3
-0.6
-0.2
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.1
-0.4
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.5
-0.4
-0.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
-0.5
+0.1
+0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.4
-1.3
+0.0
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.4
-0.4
+0.0
+0.2
nf_with_fulln
NF_with_fullN
-0.4
-0.1
+0.3
-0.1
-0.2
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.2
-0.5
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
+0.3
-0.4
+0.0
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.1
-0.3
+0.1
-0.4
nl-ccm_agar
NL-CCM_agar
+0.0
+0.3
-0.6
-0.1
-0.1
mgl
MGL
+0.1
-0.8
+0.5
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.4
-0.5
-0.0
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
+0.3
-0.1
+0.3
nl-ccm_agar
NL-CCM_agar
-0.1
+0.3
-0.4
+0.3
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.2
+0.1
+0.4
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.5
-0.1
+0.0
-0.1
nln
NLN
+0.3
-0.0
+0.2
+0.2
+0.3
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