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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03623 and MPMX19_03624 are separated by 24 nucleotides
MPMX19_03624 and MPMX19_03625 are separated by 101 nucleotides
MPMX19_03625 and MPMX19_03626 are separated by 44 nucleotides
MPMX19_03626 and MPMX19_03627 are separated by 313 nucleotides
MPMX19_03623: MPMX19_03623 - Ribose import permease protein RbsC, at 1,057,792 to 1,058,829
_03623
MPMX19_03624: MPMX19_03624 - Ribose import binding protein RbsB, at 1,058,854 to 1,059,846
_03624
MPMX19_03625: MPMX19_03625 - Inosose dehydratase, at 1,059,948 to 1,061,015
_03625
MPMX19_03626: MPMX19_03626 - hypothetical protein, at 1,061,060 to 1,062,184
_03626
MPMX19_03627: MPMX19_03627 - Non-heme chloroperoxidase, at 1,062,498 to 1,063,493
_03627
Group
Condition
MPMX19
_03623
MPMX19
_03624
MPMX19
_03625
MPMX19
_03626
MPMX19
_03627
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.0
+0.1
-0.1
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.1
-0.2
+0.3
-0.7
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.3
+0.1
-0.3
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.0
-0.1
-0.2
-0.3
nl-ccm_agar
NL-CCM_agar
-0.3
-0.1
+0.1
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.1
+0.2
-0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.0
+0.1
-0.2
+0.3
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.2
-0.1
+0.1
-0.4
nf_with_fulln
NF_with_fullN
-0.0
-0.1
-0.2
+0.4
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.2
+0.1
+0.0
-0.2
mgl
MGL
+0.4
-0.1
+0.1
-0.1
-0.3
nl-ccm
NL-CCM, start OD=0.1
+0.0
-0.2
+0.1
+0.2
-0.1
mgl
MGL
+0.2
-0.4
+0.3
-0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.3
+0.1
+0.2
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
-0.2
+0.1
-0.0
-0.1
nf_with_fulln
NF_with_fullN
+0.0
-0.1
-0.3
+0.4
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.0
-0.2
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.4
+0.2
+0.2
-0.1
nf
NF
+0.2
-0.2
-0.1
+0.0
+0.2
nln
NLN
+0.1
-0.2
+0.1
+0.1
+0.1
nf_with_fulln
NF_with_fullN
-0.1
+0.1
-0.2
+0.4
+0.1
mgl
MGL
-0.2
+0.2
-0.0
+0.4
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
-0.2
+0.2
+0.1
-0.1
nln
NLN
+0.0
+0.1
+0.1
+0.3
-0.2
nf
NF
+0.4
-0.2
+0.0
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.0
+0.2
+0.3
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.1
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.3
-0.0
+0.0
+0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.0
+0.1
-0.0
+0.5
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.2
+0.0
+0.2
+0.0
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