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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03605 and MPMX19_03606 are separated by 291 nucleotides
MPMX19_03606 and MPMX19_03607 are separated by 83 nucleotides
MPMX19_03607 and MPMX19_03608 are separated by 59 nucleotides
MPMX19_03608 and MPMX19_03609 are separated by 221 nucleotides
MPMX19_03605: MPMX19_03605 - Vitamin B12 import ATP-binding protein BtuD, at 1,034,783 to 1,035,787
_03605
MPMX19_03606: MPMX19_03606 - hypothetical protein, at 1,036,079 to 1,036,834
_03606
MPMX19_03607: MPMX19_03607 - PTS system N-acetylglucosamine-specific EIICBA component, at 1,036,918 to 1,038,384
_03607
MPMX19_03608: MPMX19_03608 - N-acetylmuramic acid 6-phosphate etherase, at 1,038,444 to 1,039,352
_03608
MPMX19_03609: MPMX19_03609 - HTH-type transcriptional repressor NagR, at 1,039,574 to 1,040,332
_03609
Group
Condition
MPMX19
_03605
MPMX19
_03606
MPMX19
_03607
MPMX19
_03608
MPMX19
_03609
nl-ccm
NL-CCM, start OD=0.1
-0.4
N.D.
+0.0
-0.4
-1.6
nl-ccm_agar
NL-CCM_agar
-0.1
N.D.
-0.1
-0.5
-1.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
N.D.
+0.1
-0.5
-1.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
N.D.
+0.0
-0.4
-1.5
nf_with_fulln
NF_with_fullN
-0.3
N.D.
-0.0
-0.5
-0.9
nf_with_fulln
NF_with_fullN
-0.1
N.D.
+0.1
-0.2
-1.4
mgl
MGL
-0.2
N.D.
+0.3
-0.5
-1.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
N.D.
+0.1
+0.2
-1.7
mgl
MGL
-0.2
N.D.
-0.1
-0.0
-1.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
N.D.
-0.2
-0.5
-0.7
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
N.D.
+0.0
-0.6
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
-1.3
N.D.
+0.2
-0.1
-0.4
mgl
MGL
+0.0
N.D.
-0.1
-0.4
-1.0
mgl
MGL
-0.1
N.D.
+0.0
-0.2
-1.2
mgl
MGL
+0.4
N.D.
+0.1
-0.5
-1.4
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.7
N.D.
-0.0
+0.1
-0.8
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
N.D.
+0.0
-0.5
-0.7
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
N.D.
+0.0
-0.5
-0.7
nln
NLN
-0.2
N.D.
+0.1
-0.4
-0.8
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
N.D.
+0.1
-0.3
-1.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
N.D.
-0.0
-0.1
-1.2
nl-ccm
NL-CCM, start OD=0.3
-0.0
N.D.
-0.1
-0.1
-1.0
nl-ccm
NL-CCM, start OD=0.1
-0.0
N.D.
+0.1
-0.2
-1.1
nf
NF
-0.3
N.D.
+0.1
+0.0
-1.0
nln
NLN
-0.2
N.D.
+0.1
-0.3
-0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
N.D.
+0.0
+0.0
-1.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
N.D.
+0.1
+0.1
-1.1
mgl
MGL
+0.3
N.D.
-0.0
-0.1
-1.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
N.D.
-0.0
-0.5
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
N.D.
+0.2
-0.0
-1.0
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