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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03593 and MPMX19_03594 are separated by 223 nucleotides
MPMX19_03594 and MPMX19_03595 are separated by 131 nucleotides
MPMX19_03595 and MPMX19_03596 are separated by 75 nucleotides
MPMX19_03596 and MPMX19_03597 overlap by 28 nucleotides
MPMX19_03593: MPMX19_03593 - Protein YiiM, at 1,019,186 to 1,019,875
_03593
MPMX19_03594: MPMX19_03594 - Aspartate ammonia-lyase, at 1,020,099 to 1,021,514
_03594
MPMX19_03595: MPMX19_03595 - C4-dicarboxylate transport protein 2, at 1,021,646 to 1,022,923
_03595
MPMX19_03596: MPMX19_03596 - C4-dicarboxylate transport sensor protein DctB, at 1,022,999 to 1,024,888
_03596
MPMX19_03597: MPMX19_03597 - C4-dicarboxylate transport transcriptional regulatory protein DctD, at 1,024,861 to 1,026,201
_03597
Group
Condition
MPMX19
_03593
MPMX19
_03594
MPMX19
_03595
MPMX19
_03596
MPMX19
_03597
nf
NF
-0.3
-0.3
-0.1
-0.1
-0.5
mgl
MGL
-0.4
-0.7
-0.1
+0.2
-0.1
nf_with_fulln
NF_with_fullN
-0.0
-0.4
+0.0
+0.2
-0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
-0.6
+0.0
+0.2
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
-0.4
+0.5
-0.0
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.2
+0.3
+0.2
-0.2
nln
NLN
+0.1
-0.2
+0.2
+0.2
-0.1
nf_with_fulln
NF_with_fullN
+0.5
-0.4
-0.2
+0.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.3
+0.3
+0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.2
+0.3
+0.1
-0.3
nl-ccm_agar
NL-CCM_agar
-0.2
+0.2
+0.4
+0.3
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.1
-0.1
-0.2
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.2
+0.3
+0.2
+0.1
nl-ccm_agar
NL-CCM_agar
-0.3
-0.3
+0.4
+0.3
+0.5
mgl
MGL
-0.4
+0.3
+0.2
+0.4
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
+0.1
+0.2
+0.4
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.3
+0.4
+0.2
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.3
+0.4
+0.1
-0.2
mgl
MGL
+0.1
+0.4
-0.0
-0.1
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.1
+0.2
+0.1
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.1
+0.4
+0.3
+0.2
mgl
MGL
-0.1
+0.2
+0.8
+0.3
-0.4
nln
NLN
+0.4
-0.0
+0.2
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
+0.1
+0.4
+0.3
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.1
+0.5
+0.3
+0.3
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.1
+0.4
+0.3
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.2
+0.5
+0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.3
+0.2
+0.1
+0.7
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
+0.2
+0.4
+0.3
+0.6
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.5
+0.7
+0.4
+0.3
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